RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OR2L13Q8N349 312 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 OR52I2Q8NH67 350 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 RSPRY1Q96DX4 576 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 TCRBV5S2A0A599 114 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 RPL7P18124 248 aaKnown RBP8.13□□□□□ -1.11
COL6A6-201ENST00000358511 SFTPDP35247 375 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 HOXC5Q00444 222 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 MSI2Q96DH6 328 aaKnown RBP8.13□□□□□ -1.11
COL6A6-201ENST00000358511 PCYT2Q99447 389 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 TRAF4Q9BUZ4 470 aaPredicted RBP8.13□□□□□ -1.11
COL6A6-201ENST00000358511 HINT2Q9BX68 163 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 BCO1Q9HAY6 547 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 KCNIP2Q9NS61 270 aa8.13□□□□□ -1.11
COL6A6-201ENST00000358511 LEUTXA8MZ59 168 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 F5H5K5 113 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 EIF4EP06730 217 aaKnown RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 GDI1P31150 447 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 EPHA5P54756 1037 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 C2orf27AQ580R0 203 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 AMIGO3Q86WK7 504 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 SLC22A24Q8N4F4 322 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ELF4Q99607 663 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ENKD1Q9H0I2 346 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF891A8MT65 544 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 AQP8O94778 261 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 FURINP09958 794 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 MGST1P10620 155 aaKnown RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 RPL13AP40429 203 aaKnown RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 MMP15P51511 669 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 VAMP3Q15836 100 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 Q3ZCU0 254 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 OR7E24Q6IFN5 339 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 CHST8Q9H2A9 424 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 POLMQ9NP87 494 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ASIC5Q9NY37 505 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 TAS2R5Q9NYW4 299 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF236Q9UL36 1845 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 A6NCN8 305 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 UNCXA6NJT0 531 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 GATCO43716 136 aaKnown RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 RAD52P43351 418 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 XCR1P46094 333 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 FJX1Q86VR8 437 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 VRK2Q86Y07 508 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 OR4N5Q8IXE1 308 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 PRR22Q8IZ63 422 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 METTL27Q8N6F8 245 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 TMEM217Q8N7C4 229 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF610Q8N9Z0 462 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 RNF150Q9ULK6 438 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 PCDHB10Q9UN67 800 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 SH2D7A6NKC9 451 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 LEFTY2O00292 366 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 F2P00734 622 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 PMP2P02689 132 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 GKN2Q86XP6 184 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 FAM26EQ8N5C1 309 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 OR9A4Q8NGU2 314 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 PDLIM7Q9NR12 457 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 MUTYHQ9UIF7 546 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 C1orf105O95561 183 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 RRASP10301 218 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 RIMKLAQ8IXN7 391 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 PRSS35Q8N3Z0 413 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 MDGA1Q8NFP4 955 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 LYRM2Q9NU23 88 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 AK3Q9UIJ7 227 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 TMEM127O75204 238 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 FGF7P21781 194 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 AADACP22760 399 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 NPY4RP50391 375 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 RAB7AP51149 207 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 KCNJ10P78508 379 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 COX20Q5RI15 118 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 EGLN2Q96KS0 407 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 TMEM231Q9H6L2 316 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ADAM29Q9UKF5 820 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ZNF840PA6NDX5 716 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 MMP2P08253 660 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 ATXN1LP0C7T5 689 aaKnown RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 TYRP1P17643 537 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 POU3F3P20264 500 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 HIST1H1TP22492 207 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 SYPL1Q16563 259 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 BSCL2Q96G97 398 aaPredicted RBP8.12□□□□□ -1.11
COL6A6-201ENST00000358511 OPALINQ96PE5 141 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 BTAF1O14981 1849 aa8.12□□□□□ -1.11
COL6A6-201ENST00000358511 NPIPB15A6NHN6 443 aaPredicted RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 ZAR1LA6NP61 321 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 H7BYZ3 331 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 NUDT21O43809 227 aaKnown RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 CD63P08962 238 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 OR8G3PP0DMU2 310 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 TBPP20226 339 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 MRPL19P49406 292 aaKnown RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 BIDP55957 195 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 RPUSD3Q6P087 351 aaKnown RBP8.11□□□□□ -1.11
COL6A6-201ENST00000358511 Q6ZSR9 355 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 SMIM4Q8WVI0 70 aa8.11□□□□□ -1.11
COL6A6-201ENST00000358511 DOCK3Q8IZD9 2030 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms