RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 C1QCP02747 245 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 NQO1P15559 274 aaKnown RBP13.44□□□□□ -0.26
IFT20-202ENST00000357896 PCGF2P35227 344 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 CRISP3P54108 245 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 TSTQ16762 297 aaKnown RBP13.44□□□□□ -0.26
IFT20-202ENST00000357896 KLF17Q5JT82 389 aaPredicted RBP13.44□□□□□ -0.26
IFT20-202ENST00000357896 ZNF621Q6ZSS3 439 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 SERPINA11Q86U17 422 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 SLC35B4Q969S0 331 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 MRI1Q9BV20 369 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 SPATA9Q9BWV2 254 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 LRMDAQ9H2I8 198 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 C1orf198Q9H425 327 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 AKTIPQ9H8T0 292 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 BEX1Q9HBH7 125 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 CDH20Q9HBT6 801 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 MMP26Q9NRE1 261 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 PDP1Q9P0J1 537 aaPredicted RBP13.44□□□□□ -0.26
IFT20-202ENST00000357896 P2RX2Q9UBL9 471 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 RPS6KB2Q9UBS0 482 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 GPR45Q9Y5Y3 372 aa13.44□□□□□ -0.26
IFT20-202ENST00000357896 TRAV36DV7A0A075B6V5 113 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 SMIM23A6NLE4 172 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 E9PBE3 544 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 MS4A18H0YCH9 400 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 TIMM23O14925 209 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 KRT75O95678 551 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 SNAP29O95721 258 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 PTHP01270 115 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 FAM153BP0C7A2 387 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 ZNF81P51508 661 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 UCP2P55851 309 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 MS4A18Q3C1V0 323 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 PDCD4Q53EL6 469 aaKnown RBP13.43□□□□□ -0.26
IFT20-202ENST00000357896 COX20Q5RI15 118 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 C6orf89Q6UWU4 347 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 SPATC1Q76KD6 591 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 ZNF771Q7L3S4 317 aaPredicted RBP13.43□□□□□ -0.26
IFT20-202ENST00000357896 DPPA2Q7Z7J5 298 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 SKA3Q8IX90 412 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 OR1J2Q8NGS2 313 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 WFDC12Q8WWY7 111 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 APOPT1Q96IL0 206 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 EGLN1Q9GZT9 426 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 MKS1Q9NXB0 559 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 POLR3KQ9Y2Y1 108 aaPredicted RBP13.43□□□□□ -0.26
IFT20-202ENST00000357896 IFT52Q9Y366 437 aa13.43□□□□□ -0.26
IFT20-202ENST00000357896 A0A087WUJ7 227 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 ALX3O95076 343 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 HPRP00739 348 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 IGHV3-13P01766 116 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 IGHMP01871 453 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 SHBGP04278 402 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 PATE4P0C8F1 98 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 OR8G3PP0DMU2 310 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 HLA-DOBP13765 273 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 OMGP23515 440 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 MAPK11Q15759 364 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 TBC1D28Q2M2D7 210 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 FBLN7Q53RD9 439 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 MIER2Q8N344 545 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 C17orf53Q8N3J3 647 aaPredicted RBP13.42□□□□□ -0.26
IFT20-202ENST00000357896 SLC22A24Q8N4F4 322 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 SCAIQ8N9R8 606 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 OR4F5Q8NH21 305 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
IFT20-202ENST00000357896 TAF15Q92804 592 aaKnown RBP eCLIP13.42□□□□□ -0.26
IFT20-202ENST00000357896 OR51B6Q9H340 312 aa13.42□□□□□ -0.26
IFT20-202ENST00000357896 A0A0G2JPF8 293 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 PLSCR5A0PG75 271 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 HNRNPCL2B2RXH8 293 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 HNRNPCL3B7ZW38 293 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 HNRNPCL1O60812 293 aaKnown RBP13.41□□□□□ -0.26
IFT20-202ENST00000357896 UBOX5O94941 541 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 FARS2O95363 451 aaKnown RBP13.41□□□□□ -0.26
IFT20-202ENST00000357896 HNRNPCL4P0DMR1 293 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 ZNF12P17014 697 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 MAKP20794 623 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 CBLP22681 906 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 CSNK1A1P48729 337 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 ERVS71-1P61550 626 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 PMS2P3Q13401 168 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 TMEM53Q6P2H8 277 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 PXKQ7Z7A4 578 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 KLHL36Q8N4N3 616 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 PAQR4Q8N4S7 273 aaPredicted RBP13.41□□□□□ -0.26
IFT20-202ENST00000357896 ICA1LQ8NDH6 482 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 OR6S1Q8NH40 331 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 SLC38A5Q8WUX1 472 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 DNAJA4Q8WW22 397 aaPredicted RBP13.41□□□□□ -0.26
IFT20-202ENST00000357896 UBE2FQ969M7 185 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 SLC41A3Q96GZ6 507 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 TXNDC15Q96J42 360 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 PPP1R36Q96LQ0 422 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 ASPNQ9BXN1 380 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 RNF121Q9H920 327 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 TCF7L2Q9NQB0 619 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 CHST2Q9Y4C5 530 aa13.41□□□□□ -0.26
IFT20-202ENST00000357896 INSIG2Q9Y5U4 225 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms