RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 HNRNPA2B1P22626 353 aaKnown RBP16.09■□□□□ 0.17
RTN4-204ENST00000357732 GRPRP30550 384 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 GPR3P46089 330 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 H2BFSP57053 126 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 ACTBP60709 375 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 ACTG1P63261 375 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 MAT1AQ00266 395 aaKnown RBP16.09■□□□□ 0.17
RTN4-204ENST00000357732 PARM1Q6UWI2 310 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 PDZD9Q8IXQ8 264 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 ZNF676Q8N7Q3 588 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 BCORP1Q8N888 145 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 C7orf57Q8NEG2 295 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 FGF14Q92915 247 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 TMEM106AQ96A25 262 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 BMFQ96LC9 184 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 C1orf198Q9H425 327 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 LDAHQ9H6V9 325 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 MYOZ1Q9NP98 299 aaPredicted RBP16.09■□□□□ 0.17
RTN4-204ENST00000357732 MMP25Q9NPA2 562 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 HRASLS2Q9NWW9 162 aa16.09■□□□□ 0.17
RTN4-204ENST00000357732 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.08■□□□□ 0.17
RTN4-204ENST00000357732 OR5K4A6NMS3 321 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 ALOX5APP20292 161 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 COL9A1P20849 921 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 AQP2P41181 271 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 MAGEB1P43366 347 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 CTXN1P60606 82 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 TSSK4Q6SA08 328 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 TFAP2EQ6VUC0 442 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 NHLRC1Q6VVB1 395 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 BVESQ8NE79 360 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 OR6M1Q8NGM8 313 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 OR5M9Q8NGP3 310 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 ZDHHC1Q8WTX9 485 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 APMAPQ9HDC9 416 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 CPNE7Q9UBL6 633 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 GRHPRQ9UBQ7 328 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 CYB5R1Q9UHQ9 305 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 KLHDC2Q9Y2U9 406 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 OR10H1Q9Y4A9 318 aa16.08■□□□□ 0.17
RTN4-204ENST00000357732 BLOC1S5-TXNDC5H3BN57 136 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 RENP00797 406 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 GALNSP34059 522 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 SOX2P48431 317 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 UBE2IP63279 158 aaKnown RBP16.08■□□□□ 0.16
RTN4-204ENST00000357732 FUT7Q11130 342 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 EIF2B5Q13144 721 aaKnown RBP16.08■□□□□ 0.16
RTN4-204ENST00000357732 TUSC1Q2TAM9 212 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 ARSKQ6UWY0 536 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 HMGB4Q8WW32 186 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 DGAT2Q96PD7 388 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 SLC25A32Q9H2D1 315 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 C12orf4Q9NQ89 552 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 DZANK1Q9NVP4 752 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 LRIT1Q9P2V4 623 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 ZNF107Q9UII5 783 aaPredicted RBP16.08■□□□□ 0.16
RTN4-204ENST00000357732 ERVK-19Q9WJR5 959 aa16.08■□□□□ 0.16
RTN4-204ENST00000357732 KIR2DS5A0A0G2JLQ3 304 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 A0A0G2JNG1 304 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 KIR2DS3K7RE56 304 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 PMS2P2O95744 297 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 PTHLHP12272 177 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 ATF4P18848 351 aaPredicted RBP16.07■□□□□ 0.16
RTN4-204ENST00000357732 AGTR1P30556 359 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 CENPAP49450 140 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 KIR2DS5Q14953 304 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 OR5M1Q8NGP8 315 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 OR4C3Q8NH37 302 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 TNFAIP8L1Q8WVP5 186 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 ELSPBP1Q96BH3 223 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 SPACA7Q96KW9 195 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 DNTTIP1Q9H147 329 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 PRODH2Q9UF12 536 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 IKZF2Q9UKS7 526 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 DTX4Q9Y2E6 619 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 SCN2AQ99250 2005 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 TRAV8-7A0A075B6U6 113 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 H3BUI4 141 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 CLDN4O14493 209 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 RLN1P04808 185 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 TMIGD3P0DMS9 266 aaPredicted RBP16.07■□□□□ 0.16
RTN4-204ENST00000357732 ZNF35P13682 527 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 PRSS3P35030 304 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 CD96P40200 585 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 ALG11Q2TAA5 492 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 GXYLT1Q4G148 440 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 EEF1A1P5Q5VTE0 462 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 FNDC7Q5VTL7 733 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 MAMSTRQ6ZN01 415 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 OR52B4Q8NGK2 314 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 OR9A4Q8NGU2 314 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 COQ8AQ8NI60 647 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 ST8SIA4Q92187 359 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 CXorf58Q96LI9 332 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 C4orf45Q96LM5 186 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 OR1F2PQ96R84 312 aa16.07■□□□□ 0.16
RTN4-204ENST00000357732 SLC25A21Q9BQT8 299 aaPredicted RBP16.07■□□□□ 0.16
RTN4-204ENST00000357732 PELOQ9BRX2 385 aaKnown RBP16.07■□□□□ 0.16
RTN4-204ENST00000357732 POTEKPQ9BYX7 375 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms