RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SLC9B1P1A6NJY1 282 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 PEX12O00623 359 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 CT45A8P0DMV1 189 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 CT45A9P0DMV2 189 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 KCNJ3P48549 501 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 CT45A2Q5DJT8 189 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 PLXDC1Q8IUK5 500 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 OR4Q3Q8NH05 313 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 FYTTD1Q96QD9 318 aaKnown RBP6.09□□□□□ -1.43
VPS13B-202ENST00000357162 OR2A14Q96R47 310 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 NSG1A0A0A6YYJ2 146 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 TRAF3IP2O43734 574 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-202ENST00000357162 TNFSF4P23510 183 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 RABIFP47224 123 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 BEX3Q00994 111 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 TMEM183BQ1AE95 376 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 DLEU7Q6UYE1 221 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 GOT1L1Q8NHS2 421 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-202ENST00000357162 EGLN2Q96KS0 407 aa6.09□□□□□ -1.43
VPS13B-202ENST00000357162 CDCA3Q99618 268 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-202ENST00000357162 AGRNO00468 2067 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 PCSK6P29122 969 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 MCCD1P59942 119 aaPredicted RBP6.09□□□□□ -1.44
VPS13B-202ENST00000357162 FXNQ16595 210 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 Q6ZVU0 165 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 BAGE3Q86Y29 109 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 BAGE2Q86Y30 109 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF610Q8N9Z0 462 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 RRAGCQ9HB90 399 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 PRRC2AP48634 2157 aaKnown RBP6.09□□□□□ -1.44
VPS13B-202ENST00000357162 FIGNL2A6NMB9 653 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 TMEM225BP0DP42 221 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 LIPAP38571 399 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 EMP2P54851 167 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 TIGITQ495A1 244 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 GDPD3Q7L5L3 318 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 GPR137CQ8N3F9 429 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 NEURL2Q9BR09 285 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 SLC35D1Q9NTN3 355 aa6.09□□□□□ -1.44
VPS13B-202ENST00000357162 NDRG2Q9UN36 371 aaKnown RBP6.09□□□□□ -1.44
VPS13B-202ENST00000357162 LGALS8O00214 317 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 GLCEO94923 617 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF136P52737 540 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 GPR18Q14330 331 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 PRSS42Q7Z5A4 293 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 UCN3Q969E3 161 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 LPAR4Q99677 370 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CNIH4Q9P003 139 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 GREB1Q4ZG55 1949 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 IFITM5A6NNB3 132 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 SCO2O43819 266 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 IL3RAP26951 378 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 IDUAP35475 653 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 SLC14A1Q13336 389 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 MKXQ8IYA7 352 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 PIGQQ9BRB3 760 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 METTL9Q9H1A3 318 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 LSM5Q9Y4Y9 91 aaKnown RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 IGLON5A6NGN9 336 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 MT-ND4P03905 459 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 SGCBQ16585 318 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 DND1Q8IYX4 353 aaKnown RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 FRZBQ92765 325 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CBLP22681 906 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CDKN1CP49918 316 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 PIN1Q13526 163 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ALKAL2Q6UX46 152 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 GLDNQ6ZMI3 551 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 TSTD1Q8NFU3 115 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 OR9Q2Q8NGE9 314 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 FGF20Q9NP95 211 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 TCRBV5S1A1TA0A578 114 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 A8MX80 341 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 LEFTY1O75610 366 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 MPIG6BO95866 241 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ITGB2P05107 769 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 HOXB1P14653 301 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 RAB6AP20340 208 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CSNK1A1P48729 337 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CLINT1Q14677 625 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 LYPD4Q6UWN0 246 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ABI3BPQ7Z7G0 1075 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 OR5K2Q8NHB8 316 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 OR8D2Q9GZM6 311 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF225Q9UK10 706 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 POU2F3Q9UKI9 436 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 FURINP09958 794 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 CT45A10P0DMU9 189 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 EGR3Q06889 387 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 LGALSLQ3ZCW2 172 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-202ENST00000357162 RAB40CQ96S21 281 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 DLL4Q9NR61 685 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 ROBO1Q9Y6N7 1651 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 XRCC3O43542 346 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 SLC35A1P78382 337 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 PLGLAQ15195 96 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 Q6ZVL8 140 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 SPATC1Q76KD6 591 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 OR2W3Q7Z3T1 314 aa6.08□□□□□ -1.44
VPS13B-202ENST00000357162 OR51F2Q8NH61 342 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms