RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 C19orf53Q9UNZ5 99 aaPredicted RBP9.21□□□□□ -0.94
SYNE1-203ENST00000354674 MMACHCQ9Y4U1 282 aa9.21□□□□□ -0.94
SYNE1-203ENST00000354674 IGKV3D-11A0A0A0MRZ8 115 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 SULT1A3P0DMM9 295 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 SULT1A4P0DMN0 295 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF14P17017 642 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 CRYBA2P53672 197 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 PON3Q15166 354 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF630Q2M218 657 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF791Q3KP31 576 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 C19orf48Q6RUI8 117 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 QSOX2Q6ZRP7 698 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 PPP1R3BQ86XI6 285 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 SPAG16Q8N0X2 631 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 OR5M1Q8NGP8 315 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 BBS10Q8TAM1 723 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 HOXB13Q92826 284 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 MISP3Q96FF7 219 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF75AQ96N20 296 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 TBX5Q99593 518 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 AUNIPQ9H7T9 357 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 NCDNQ9UBB6 729 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 GPR179Q6PRD1 2367 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 OR6C76A6NM76 312 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 B4E171 279 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 FMO6PO60774 539 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 SCRG1O75711 98 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 YIF1AO95070 293 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ANXA2P07355 339 aaKnown RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF35P13682 527 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 DAOP14920 347 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 S1PR1P21453 382 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 FBLP22087 321 aaKnown RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 LAP3P28838 519 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 PTGER1P34995 402 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 TSPAN7P41732 249 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 PCBP3P57721 371 aaKnown RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 BTG2P78543 158 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 INSM1Q01101 510 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ID2Q02363 134 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 SNTB2Q13425 540 aaKnown RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 HABP2Q14520 560 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 KRBOX4Q5JUW0 171 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 C11orf88Q6PI97 169 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 CEACAM20Q6UY09 585 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 DGAT2L6Q6ZPD8 337 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF248Q8NDW4 579 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 NUP43Q8NFH3 380 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 OR4Q3Q8NH05 313 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 KAT2AQ92830 837 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 SLAMF9Q96A28 289 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 C14orf79Q96F83 325 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 SLC35G5Q96KT7 338 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 APMAPQ9HDC9 416 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 MKKSQ9NPJ1 570 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 MEPEQ9NQ76 525 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 GSTK1Q9Y2Q3 226 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 C7orf66A4D0T2 115 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 AGPAT2O15120 278 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 SEC14L5O43304 696 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 DKK1O94907 266 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 IFNA4P05014 189 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 HMGN2P05204 90 aaKnown RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 AHCYP23526 432 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 MAP3K8P41279 467 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 BPIFB3P59826 476 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ERV3-1Q14264 604 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ODF4Q2M2E3 257 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM255AQ5JRV8 349 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF660Q6AZW8 331 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 FAM111BQ6SJ93 734 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 NR2C2APQ86WQ0 139 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 C9orf43Q8TAL5 461 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM163Q8TC26 289 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 OR2M2Q96R28 347 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 MICU1Q9BPX6 476 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 NAA11Q9BSU3 229 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 GABARAPL1Q9H0R8 117 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 RPS6KB2Q9UBS0 482 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 NDOR1Q9UHB4 597 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 ING1Q9UK53 422 aaPredicted RBP9.2□□□□□ -0.94
SYNE1-203ENST00000354674 FAM96BQ9Y3D0 163 aa9.2□□□□□ -0.94
SYNE1-203ENST00000354674 PRAMEF27A3QJZ7 478 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 MPTX1A8MV57 137 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 PROB1E7EW31 1015 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 CH25HO95992 272 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 SEMG1P04279 462 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 FBP1P09467 338 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 CT62P0C5K7 136 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 ADCYAP1P18509 176 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 EFNA3P52797 238 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 RAB5BP61020 215 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 RPS26P62854 115 aaKnown RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 LSM11P83369 360 aaKnown RBP eCLIP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 SCARB2Q14108 478 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 C2orf68Q2NKX9 166 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM44Q2T9K0 475 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 TRMT12Q53H54 448 aaKnown RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 C3orf38Q5JPI3 329 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms