RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 STOMP27105 288 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 CD1BP29016 333 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 NSG1P42857 185 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SSR1P43307 286 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 RAB9AP51151 201 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TPM4P67936 248 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 PHEXP78562 749 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 PDIA2Q13087 525 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ART3Q13508 389 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 LY6DQ14210 128 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 GGTLC2Q14390 218 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TWIST1Q15672 202 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ZFP69Q49AA0 526 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 KLHL22Q53GT1 634 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 C9orf66Q5T8R8 295 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 MLIPQ5VWP3 458 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 VTCN1Q7Z7D3 282 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 FAM9CQ8IZT9 166 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 GPR137CQ8N3F9 429 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 OR10H4Q8NGA5 316 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 LKAAEAR1Q8TD35 194 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TMEM80Q96HE8 168 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 RARRES2Q99969 163 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 RBM4BQ9BQ04 359 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SLITRK2Q9H156 845 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 UBQLN1Q9UMX0 589 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 VPS13CQ709C8 3753 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 DLEC1Q9Y238 1755 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TRBV7-9A0A0J9YWB2 115 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 A0A1W2PPV4 95 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 FOXI3A8MTJ6 420 aaPredicted RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 A8MXK9 166 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ENTPD5O75356 428 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 OR7A10O76100 309 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 OAZ2O95190 189 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 BMP15O95972 392 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 CD55P08174 381 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 CDK4P11802 303 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 VDAC1P21796 283 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ANXA13P27216 316 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ADORA2BP29275 332 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 EPHX2P34913 555 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 CSNK1A1P48729 337 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SERPINB8P50452 374 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 HILS1P60008 231 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ACVR1Q04771 509 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 GPR176Q14439 515 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 OXA1LQ15070 435 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TEAD2Q15562 447 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 KLHL40Q2TBA0 621 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 KLHL38Q2WGJ6 581 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 HNRNPA1L2Q32P51 320 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 VPS26BQ4G0F5 336 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 HSP90B2PQ58FF3 399 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 IFNEQ86WN2 208 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ZFAND4Q86XD8 727 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 MMAAQ8IVH4 418 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 PIANPQ8IYJ0 282 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 CMTM8Q8IZV2 173 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 MTURNQ8N3F0 131 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ARRDC1Q8N5I2 433 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 OR4A4PQ8NGN8 299 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 FLVCR1-AS1Q8TAF5 88 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TCP10LQ8TDR4 215 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 GLYATL2Q8WU03 294 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TSEN15Q8WW01 171 aaKnown RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TAF15Q92804 592 aaKnown RBP eCLIP1.29□□□□□ -2.26e-6■□□□□ 11.2
BRCA1-202ENST00000354071 RAB1CQ92928 201 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ECHDC3Q96DC8 303 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TSNARE1Q96NA8 513 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 NIPSNAP3BQ9BS92 247 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 WACQ9BTA9 647 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TMEM59Q9BXS4 323 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 BEX2Q9BXY8 128 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 KRTAP2-2Q9BYT5 123 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 REEP4Q9H6H4 257 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 FGF22Q9HCT0 170 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 TIGARQ9NQ88 270 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 C20orf96Q9NUD7 363 aaPredicted RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 CENPFP49454 3210 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 FLT4P35916 1363 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 LOC100506127A0A0U1RQW1 187 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 A0A1B0GTH9 108 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 FAM172BPA6NC97 362 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 G3V3Y1 287 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ACSM4P0C7M7 580 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF24P17028 368 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 GABRG2P18507 467 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SPRP35270 261 aaPredicted RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 DDOSTP39656 456 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 ERVK11-1P61568 191 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SRPXP78539 464 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 SCRN3Q0VDG4 424 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 KCNJ11Q14654 390 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 CYP51A1Q16850 503 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 KCTD19Q17RG1 926 aaPredicted RBP1.29□□□□□ -2.2
BRCA1-202ENST00000354071 MS4A18Q3C1V0 323 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 Q3ZCU0 254 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 KRTAP5-4Q6L8H1 288 aa1.29□□□□□ -2.2
BRCA1-202ENST00000354071 EMBQ6PCB8 327 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms