RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TAF13Q15543 124 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF124Q15973 351 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 POM121L1PQ3SYA9 428 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 BEX5Q5H9J7 111 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 STEAP1BQ6NZ63 245 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ANKRD16Q6P6B7 361 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 WDR88Q6ZMY6 472 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 FRRS1Q6ZNA5 592 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 NRROSQ86YC3 692 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 CYB561A3Q8NBI2 242 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 CLEC1AQ8NC01 280 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 OR4K14Q8NGD5 310 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 OR2A1Q8NGT9 310 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 PPP1R1CQ8WVI7 109 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 GTF3AQ92664 365 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MRPL38Q96DV4 380 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 HDAC8Q9BY41 377 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 AICDAQ9GZX7 198 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MRPS30Q9NP92 439 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 SDHAF3Q9NRP4 125 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 C20orf141Q9NUB4 165 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 C2orf42Q9NWW7 574 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 RPH3AQ9Y2J0 694 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ATG4BQ9Y4P1 393 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 TCF20Q9UGU0 1960 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 CCL16O15467 120 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 TXNL1O43396 289 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ERI3O43414 337 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 LYPD3O95274 346 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 GYPBP06028 91 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 APEHP13798 732 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MUC1P15941 1255 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 PTNP21246 168 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 PSMB5P28074 263 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 CD34P28906 385 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 BCL6P41182 706 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 RBM34P42696 430 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 EEF1A1P68104 462 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF234Q14588 700 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 DHCR24Q15392 516 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 NKPD1Q17RQ9 610 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ALG11Q2TAA5 492 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MST1LQ2TV78 715 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 TMEM244Q5VVB8 128 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MFSD12Q6NUT3 480 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ARHGAP11AQ6P4F7 1023 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ZCCHC12Q6PEW1 402 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 SLC35F3Q8IY50 421 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 LINC01555Q8NAE3 123 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 INO80EQ8NBZ0 244 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 OR13C2Q8NGS9 318 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MYLIPQ8WY64 445 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 RGP1Q92546 391 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ZDHHC12Q96GR4 267 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ZC3H10Q96K80 434 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 HSPA12BQ96MM6 686 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 CFHR5Q9BXR6 569 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 POTEKPQ9BYX7 375 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 SEMA6CQ9H3T2 930 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 OPA3Q9H6K4 179 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 PRSS16Q9NQE7 514 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 UFSP2Q9NUQ7 469 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 ASH2LQ9UBL3 628 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 SLC23A2Q9UGH3 650 aa9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 YBX2Q9Y2T7 364 aaKnown RBP9.41□□□□□ -0.9
CHRNA1-202ENST00000348749 MUC22E2RYF6 1773 aaPredicted RBP9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 IGKV1-8A0A0C4DH67 115 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 A0A1W2PPE3 182 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 BLOC1S5-TXNDC5H3BN57 136 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 PQBP1O60828 265 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 ADH1CP00326 375 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 CD3DP04234 171 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 DBIP07108 87 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 HOXC4P09017 264 aaPredicted RBP9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 OR8U8P0C7N1 319 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 FAM157CP0CG43 387 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 ADH5P11766 374 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 ADRA2CP18825 462 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 RPS4Y1P22090 263 aaKnown RBP9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 CFPP27918 469 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 PSMB10P40306 273 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 MC3RP41968 323 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 P2RY4P51582 365 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 PDX1P52945 283 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 ATP1B3P54709 279 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 ACTBP60709 375 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 ACTG1P63261 375 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 CDK3Q00526 305 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 AMZ1Q400G9 498 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF425Q6IV72 752 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 ZNF836Q6ZNA1 936 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 LRRTM1Q86UE6 522 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 STX12Q86Y82 276 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 BAP18Q8IXM2 172 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 GABRG1Q8N1C3 465 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 PAQR4Q8N4S7 273 aaPredicted RBP9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 KDF1Q8NAX2 398 aaPredicted RBP9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 MFSD9Q8NBP5 474 aa9.4□□□□□ -0.9
CHRNA1-202ENST00000348749 BPIFA2Q96DR5 249 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms