RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 GLTPQ9NZD2 209 aa11.51□□□□□ -0.57
CLCC1-202ENST00000348264 RIMS3Q9UJD0 308 aa11.51□□□□□ -0.57
CLCC1-202ENST00000348264 COL6A5A8TX70 2615 aa11.51□□□□□ -0.57
CLCC1-202ENST00000348264 B9A039 149 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 CD5LO43866 347 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 PIP5K1CO60331 668 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 OR7A10O76100 309 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 IFNA14P01570 189 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 MT-ND1P03886 318 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 TP53P04637 393 aaPredicted RBP11.5□□□□□ -0.57
CLCC1-202ENST00000348264 PGA4P0DJD7 388 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 PGA3P0DJD8 388 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 SLC25A16P16260 332 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 ZNF14P17017 642 aaPredicted RBP11.5□□□□□ -0.57
CLCC1-202ENST00000348264 FUT4P22083 530 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 KDELR2P33947 212 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 THBS4P35443 961 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 RBM34P42696 430 aaKnown RBP11.5□□□□□ -0.57
CLCC1-202ENST00000348264 GIPRP48546 466 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 RPL18Q07020 188 aaKnown RBP11.5□□□□□ -0.57
CLCC1-202ENST00000348264 PIGFQ07326 219 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 SNTB2Q13425 540 aaKnown RBP11.5□□□□□ -0.57
CLCC1-202ENST00000348264 RP9Q8TA86 221 aaKnown RBP11.5□□□□□ -0.57
CLCC1-202ENST00000348264 TMEM239Q8WW34 195 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 ZNF566Q969W8 418 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 TPD52L3Q96J77 140 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 POLR2J2Q9GZM3 115 aaKnown RBP11.5□□□□□ -0.57
CLCC1-202ENST00000348264 POLR2J3Q9H1A7 115 aaKnown RBP11.5□□□□□ -0.57
CLCC1-202ENST00000348264 ADAM21Q9UKJ8 722 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 CUBNO60494 3623 aa11.5□□□□□ -0.57
CLCC1-202ENST00000348264 ELOVL7A1L3X0 281 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-202ENST00000348264 BLOC1S5-TXNDC5H3BN57 136 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 hCG_2039718K7EN88 272 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 CRLF1O75462 422 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 F12P00748 615 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-202ENST00000348264 HIST1H2ABP04908 130 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 F13BP05160 661 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 CSF3P09919 207 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 COX4I1P13073 169 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 PTDSS1P48651 473 aaKnown RBP11.49□□□□□ -0.57
CLCC1-202ENST00000348264 RUNX1T1Q06455 604 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 LOXL1Q08397 574 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-202ENST00000348264 MSMPQ1L6U9 139 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 TMEM249Q2WGJ8 235 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 KRT80Q6KB66 452 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 LRFN4Q6PJG9 635 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 HIST3H2AQ7L7L0 130 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 ARPINQ7Z6K5 226 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 VTCN1Q7Z7D3 282 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 TREML1Q86YW5 311 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 SLC15A3Q8IY34 581 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 SVOPLQ8N434 492 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 NOXO1Q8NFA2 376 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 FGFBP3Q8TAT2 258 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 HIST1H2ACQ93077 130 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 SGTBQ96EQ0 304 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 SLC25A44Q96H78 314 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-202ENST00000348264 PRRC1Q96M27 445 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 VRK1Q99986 396 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-202ENST00000348264 TMEM38BQ9NVV0 291 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 A4GNTQ9UNA3 340 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 FKBP7Q9Y680 259 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 SVEP1Q4LDE5 3571 aa11.49□□□□□ -0.57
CLCC1-202ENST00000348264 TMEM129A0AVI4 362 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 NME4O00746 187 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 DHHO43323 396 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 TLX2O43763 284 aaPredicted RBP11.48□□□□□ -0.57
CLCC1-202ENST00000348264 RAB36O95755 333 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 BCL10O95999 233 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 IGF2P01344 180 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 IGHG1P01857 330 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 PATE4P0C8F1 98 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 THRBP10828 461 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 ZNF35P13682 527 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 FUT1P19526 365 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 NPR2P20594 1047 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 AQP2P41181 271 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 PPOXP50336 477 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 SLC7A2P52569 658 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 SELENOWP63302 87 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 LSM11P83369 360 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLCC1-202ENST00000348264 LIPEQ05469 1076 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 DAG1Q14118 895 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 C8orf82Q6P1X6 216 aaPredicted RBP11.48□□□□□ -0.57
CLCC1-202ENST00000348264 SPATA21Q7Z572 469 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 ZNF584Q8IVC4 421 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 SKA3Q8IX90 412 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 CDK20Q8IZL9 346 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 SLC22A24Q8N4F4 322 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 IL17RDQ8NFM7 739 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 MOSPD2Q8NHP6 518 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 ASB10Q8WXI3 467 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 TNFRSF13CQ96RJ3 184 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 ZNF347Q96SE7 839 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 YAE1D1Q9NRH1 226 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 SNX13Q9Y5W8 968 aa11.48□□□□□ -0.57
CLCC1-202ENST00000348264 A0A1W2PRG6 482 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 VWC2LB2RUY7 222 aa11.47□□□□□ -0.57
CLCC1-202ENST00000348264 MCIDASD6RGH6 385 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms