RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 ULK3Q6PHR2 472 aa19.33■□□□□ 0.69
PTPN18-202ENST00000347849 OR52I2Q8NH67 350 aa19.33■□□□□ 0.69
PTPN18-202ENST00000347849 KLK11Q9UBX7 282 aa19.33■□□□□ 0.69
PTPN18-202ENST00000347849 TRBV2A0A0J9YWF9 115 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 ARPC1BO15143 372 aaKnown RBP19.33■□□□□ 0.68
PTPN18-202ENST00000347849 CTDSPLO15194 276 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 TGM6O95932 706 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 RAD52P43351 418 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 RGS19P49795 217 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 MAP2K6P52564 334 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 RPS11P62280 158 aaKnown RBP eCLIP19.33■□□□□ 0.68
PTPN18-202ENST00000347849 ACTC1P68032 377 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 ACTA1P68133 377 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 CCL7P80098 99 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 UBE2NLQ5JXB2 153 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 FNDC7Q5VTL7 733 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 RPL13AP3Q6NVV1 102 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 SEZ6L2Q6UXD5 910 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 BAIAP2L2Q6UXY1 529 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 COX15Q7KZN9 410 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 MAML2Q8IZL2 1156 aaPredicted RBP19.33■□□□□ 0.68
PTPN18-202ENST00000347849 UXS1Q8NBZ7 420 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 SMIM19Q96E16 107 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 SLC46A1Q96NT5 459 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 MGAT4CQ9UBM8 478 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 ZDBF2Q9HCK1 2354 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 ADAMTS20P59510 1910 aa19.33■□□□□ 0.68
PTPN18-202ENST00000347849 ASCC3Q8N3C0 2202 aaKnown RBP19.32■□□□□ 0.68
PTPN18-202ENST00000347849 OGG1O15527 345 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 ACSM4P0C7M7 580 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 RORAP35398 523 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 GBX2P52951 348 aaPredicted RBP19.32■□□□□ 0.68
PTPN18-202ENST00000347849 SIRPAP78324 504 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 CDK5R1Q15078 307 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 ELAVL1Q15717 326 aaKnown RBP19.32■□□□□ 0.68
PTPN18-202ENST00000347849 FAM69AQ5T7M9 428 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 TMEM71Q6P5X7 295 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 C3orf49Q96BT1 292 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 UTS2O95399 124 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 IL33O95760 270 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 UCHL1P09936 223 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 MST1P26927 711 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 NAA10P41227 235 aaPredicted RBP19.32■□□□□ 0.68
PTPN18-202ENST00000347849 OR52E2Q8NGJ4 325 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 MOSPD2Q8NHP6 518 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 PHOSPHO1Q8TCT1 267 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 LCORQ96JN0 433 aaPredicted RBP19.32■□□□□ 0.68
PTPN18-202ENST00000347849 C12orf4Q9NQ89 552 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 NPDC1Q9NQX5 325 aaPredicted RBP19.32■□□□□ 0.68
PTPN18-202ENST00000347849 HAO2Q9NYQ3 351 aa19.32■□□□□ 0.68
PTPN18-202ENST00000347849 HOXD4P09016 255 aaPredicted RBP19.31■□□□□ 0.68
PTPN18-202ENST00000347849 CXCL2P19875 107 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 PSMB10P40306 273 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 CCR4P51679 360 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 EBPQ15125 230 aaKnown RBP19.31■□□□□ 0.68
PTPN18-202ENST00000347849 METTL11BQ5VVY1 283 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 C3P1Q6ZMU1 363 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 OVCH1Q7RTY7 1134 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 SNX33Q8WV41 574 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 ELMOD3Q96FG2 381 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 NRIP3Q9NQ35 241 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 UBQLN4Q9NRR5 601 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 CA10Q9NS85 328 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 ZNF275Q9NSD4 429 aaPredicted RBP19.31■□□□□ 0.68
PTPN18-202ENST00000347849 GNG8Q9UK08 70 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 TRIM77I1YAP6 450 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 ICOSLGO75144 302 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 WISP1O95388 367 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 PSMD4P55036 377 aaKnown RBP19.31■□□□□ 0.68
PTPN18-202ENST00000347849 NHLRC3Q5JS37 347 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 FAAP20Q6NZ36 180 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 KCTD20Q7Z5Y7 419 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 ZNF433Q8N7K0 673 aaPredicted RBP19.31■□□□□ 0.68
PTPN18-202ENST00000347849 OR4K13Q8NH42 304 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 WDR89Q96FK6 387 aaPredicted RBP19.31■□□□□ 0.68
PTPN18-202ENST00000347849 LINC00052Q96N35 136 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 PPA2Q9H2U2 334 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 NOX3Q9HBY0 568 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 NANSQ9NR45 359 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 EMC3Q9P0I2 261 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 ZNF69Q9UC07 566 aa19.31■□□□□ 0.68
PTPN18-202ENST00000347849 A0A087WUJ7 227 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 EFCAB7A8K855 629 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 GDF9O60383 454 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 PRAF2O60831 178 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 KHDRBS3O75525 346 aaKnown RBP19.3■□□□□ 0.68
PTPN18-202ENST00000347849 CFIP05156 583 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 PTHLHP12272 177 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 SRMP19623 302 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 EDNRAP25101 427 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 HOXA6P31267 233 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 RBM34P42696 430 aaKnown RBP19.3■□□□□ 0.68
PTPN18-202ENST00000347849 MAGEB1P43366 347 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 NR0B1P51843 470 aaKnown RBP19.3■□□□□ 0.68
PTPN18-202ENST00000347849 CLDN12P56749 244 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 FAM199XQ6PEV8 388 aaPredicted RBP19.3■□□□□ 0.68
PTPN18-202ENST00000347849 MAMSTRQ6ZN01 415 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 C16orf47Q6ZP98 133 aaPredicted RBP19.3■□□□□ 0.68
PTPN18-202ENST00000347849 FCRLAQ7L513 359 aa19.3■□□□□ 0.68
PTPN18-202ENST00000347849 KMT5CQ86Y97 462 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms