RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 BCORQ6W2J9 1755 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 A0A1B0GVG6 124 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 ZNF217O75362 1048 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 PIP5KL1Q5T9C9 394 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 SFT2D1Q8WV19 159 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 GINS3Q9BRX5 216 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 RARRES3Q9UL19 164 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 TRAF3IP2O43734 574 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-202ENST00000347401 AQP8O94778 261 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 SDHBP21912 280 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 RPS26P11Q5JNZ5 115 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-202ENST00000347401 CORO6Q6QEF8 472 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 Q6ZTK2 550 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 WRAP73Q9P2S5 460 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-202ENST00000347401 LRP6O75581 1613 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 CADP27708 2225 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 PDGFBP01127 241 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-202ENST00000347401 ALG12Q9BV10 488 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 GCSHP23434 173 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 HIST1H3AP68431 136 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 CPNE8Q86YQ8 564 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 CISD2Q8N5K1 135 aaKnown RBP12.35□□□□□ -0.43
COL6A3-202ENST00000347401 OR4F15Q8NGB8 312 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 VAMP8Q9BV40 100 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 SLC2A9Q9NRM0 540 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 TM7SF3Q9NS93 570 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 MARCH4Q9P2E8 410 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-202ENST00000347401 EDN1P05305 212 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 ACSM4P0C7M7 580 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 CSN1S1P47710 185 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 PTTG1IPP53801 180 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 SLC10A2Q12908 348 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-202ENST00000347401 SLC36A2Q495M3 483 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 OR2G3Q8NGZ4 309 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 GABARAPL3Q9BY60 117 aa12.35□□□□□ -0.43
COL6A3-202ENST00000347401 ANKUB1A6NFN9 424 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 CLDN1O95832 211 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 JMJD7P0C870 316 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 KCNJ3P48549 501 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 MTCP1P56278 107 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 IAH1Q2TAA2 248 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 TXNDC8Q6A555 127 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 ZNF852Q6ZMS4 543 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 ASB11Q8WXH4 323 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 FBXL2Q9UKC9 423 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 TMEM235A6NFC5 223 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 GABRR3A8MPY1 467 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 ZNF264O43296 627 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 SOX15O60248 233 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 SLC35A1P78382 337 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 BAXQ07812 192 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 PTBP3O95758 552 aaKnown RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 EIF4EP06730 217 aaKnown RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 CFHP08603 1231 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 CPMP14384 443 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 ACKR3P25106 362 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 HOXA1P49639 335 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 KCTD11Q693B1 232 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 OR52W1Q6IF63 320 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 SLC35D2Q76EJ3 337 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 OR52I1Q8NGK6 324 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 EMG1Q92979 244 aaKnown RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 SFXN1Q9H9B4 322 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 PRLHRP49683 370 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 SCAND1P57086 179 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 EGR3Q06889 387 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 TMEM71Q6P5X7 295 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 NECTIN4Q96NY8 510 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 RIMS4Q9H426 269 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 FBP1P09467 338 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 HSF1Q00613 529 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 LMAN2Q12907 356 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 PSAPL1Q6NUJ1 521 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 MMP21Q8N119 569 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 PGBD5Q8N414 524 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 MSLNLQ96KJ4 702 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 GAB2Q9UQC2 676 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 G3V3Q6 166 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 SERPINA2P20848 420 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 MPPED2Q15777 294 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 LY6G5CQ5SRR4 150 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 ESPNLQ6ZVH7 1005 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 ZNF551Q7Z340 670 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 FUNDC1Q8IVP5 155 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 SDR9C7Q8NEX9 313 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 LMX1AQ8TE12 382 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 CPPED1Q9BRF8 314 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-202ENST00000347401 ABCA7Q8IZY2 2146 aa12.34□□□□□ -0.43
COL6A3-202ENST00000347401 TM4SF1P30408 202 aa12.33□□□□□ -0.43
COL6A3-202ENST00000347401 NPSR1Q6W5P4 371 aa12.33□□□□□ -0.43
COL6A3-202ENST00000347401 OR8U1Q8NH10 309 aa12.33□□□□□ -0.43
COL6A3-202ENST00000347401 TVP23CQ96ET8 276 aa12.33□□□□□ -0.43
COL6A3-202ENST00000347401 TCTN2Q96GX1 697 aa12.33□□□□□ -0.43
COL6A3-202ENST00000347401 ZNF840PA6NDX5 716 aa12.33□□□□□ -0.44
COL6A3-202ENST00000347401 OLIG2Q13516 323 aa12.33□□□□□ -0.44
COL6A3-202ENST00000347401 ALKBH1Q13686 389 aaKnown RBP12.33□□□□□ -0.44
COL6A3-202ENST00000347401 TAZQ16635 292 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms