RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 GINS3Q9BRX5 216 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 NDFIP1Q9BT67 221 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 PLEKHA2Q9HB19 425 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 DOCK8Q8NF50 2099 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 TRBV4-1A0A0J9YWV2 114 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 TUSC2O75896 110 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 IL1RNP18510 177 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 VIPR2P41587 438 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 OR10J5Q8NHC4 309 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 ABHD4Q8TB40 342 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 FAM72CH0Y354 149 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 YY2O15391 372 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 YKT6O15498 198 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 IGHEP01854 428 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 ICAM2P13598 275 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 FAM72AQ5TYM5 149 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 AGBL4Q5VU57 503 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 FAM72DQ6L9T8 149 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 FAM72BQ86X60 149 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 SCAMP4Q969E2 229 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 PLEKHF2Q9H8W4 249 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF629Q9UEG4 869 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-201ENST00000345617 IGLON5A6NGN9 336 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF840PA6NDX5 716 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 SLC36A2Q495M3 483 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 V9GYS6 101 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 CTRB1P17538 263 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 HNRNPA3P51991 378 aaKnown RBP17.97■□□□□ 0.47
HDAC4-201ENST00000345617 ACOT6Q3I5F7 207 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-201ENST00000345617 CTRB2Q6GPI1 263 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 RABEPKQ7Z6M1 372 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 ZNRF4Q8WWF5 429 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 SLC46A1Q96NT5 459 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 SYT17Q9BSW7 474 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 CORINQ9Y5Q5 1042 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 ALPK2Q86TB3 2170 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 G3V3Q6 166 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 PHF1O43189 567 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-201ENST00000345617 RNGTTO60942 597 aaKnown RBP17.97■□□□□ 0.47
HDAC4-201ENST00000345617 PAPLNO95428 1278 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 HMGN2P05204 90 aaKnown RBP17.97■□□□□ 0.47
HDAC4-201ENST00000345617 TOPAZ1Q8N9V7 1692 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF891A8MT65 544 aaPredicted RBP17.97■□□□□ 0.47
HDAC4-201ENST00000345617 MAN2B1O00754 1011 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 TPPP2P59282 170 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 SECTM1Q8WVN6 248 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 VAMP8Q9BV40 100 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 NOX4Q9NPH5 578 aa17.97■□□□□ 0.47
HDAC4-201ENST00000345617 A0A1B0GUH1 482 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 BET1O15155 118 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 CSO75390 466 aaKnown RBP17.96■□□□□ 0.47
HDAC4-201ENST00000345617 SULT1A2P50226 295 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 ARSDP51689 593 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 EPHA4P54764 986 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 CRMP1Q14194 572 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 FIGLAQ6QHK4 219 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 MMP21Q8N119 569 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 NEIL2Q969S2 332 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 TOLLIPQ9H0E2 274 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 KIR2DS5A0A0G2JLQ3 304 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 A0A0G2JNG1 304 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 KIR2DS3K7RE56 304 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 CHEK1O14757 476 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 DBHP09172 617 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 TNFRSF17Q02223 184 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 KIR2DS5Q14953 304 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 CDH26Q8IXH8 852 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 ELF4Q99607 663 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-201ENST00000345617 TMEM43Q9BTV4 400 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF217O75362 1048 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 GM2AP17900 193 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 REEP5Q00765 189 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF595Q8IYB9 648 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 UTP4Q969X6 686 aaKnown RBP17.96■□□□□ 0.47
HDAC4-201ENST00000345617 CIB3Q96Q77 187 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-201ENST00000345617 PDGFBP01127 241 aaPredicted RBP17.96■□□□□ 0.47
HDAC4-201ENST00000345617 CPEP16870 476 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 CD81P60033 236 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 OVCH1Q7RTY7 1134 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF264O43296 627 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 FPR3P25089 353 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 MRPL2Q5T653 305 aaKnown RBP17.96■□□□□ 0.47
HDAC4-201ENST00000345617 AK3Q9UIJ7 227 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF407Q9C0G0 2248 aa17.96■□□□□ 0.47
HDAC4-201ENST00000345617 ANKUB1A6NFN9 424 aa17.96■□□□□ 0.46
HDAC4-201ENST00000345617 SLC16A7O60669 478 aa17.96■□□□□ 0.46
HDAC4-201ENST00000345617 FOLR3P41439 243 aa17.96■□□□□ 0.46
HDAC4-201ENST00000345617 SLC35A1P78382 337 aa17.96■□□□□ 0.46
HDAC4-201ENST00000345617 FCN2Q15485 313 aa17.96■□□□□ 0.46
HDAC4-201ENST00000345617 SLC35G3Q8N808 338 aa17.96■□□□□ 0.46
HDAC4-201ENST00000345617 UBTD2Q8WUN7 234 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 SLC17A9Q9BYT1 436 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 PCDHGA1Q9Y5H4 931 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 ST8SIA3O43173 380 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 SPINT2O43291 252 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 FGF18O76093 207 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 FBXO45P0C2W1 286 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 BPIFB3P59826 476 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 SRYQ05066 204 aa17.95■□□□□ 0.46
HDAC4-201ENST00000345617 REEP6Q96HR9 211 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms