RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RBP7Q96R05 134 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 MED18Q9BUE0 208 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 EMC6Q9BV81 110 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 POLDIP3Q9BY77 421 aaKnown RBP10.45□□□□□ -0.74
SNCA-202ENST00000345009 DENND2DQ9H6A0 471 aaPredicted RBP10.45□□□□□ -0.74
SNCA-202ENST00000345009 NGBQ9NPG2 151 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 SLC7A10Q9NS82 523 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 ZNF226Q9NYT6 803 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 PDP1Q9P0J1 537 aaPredicted RBP10.45□□□□□ -0.74
SNCA-202ENST00000345009 PRSS50Q9UI38 385 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 SIGLEC7Q9Y286 467 aa10.45□□□□□ -0.74
SNCA-202ENST00000345009 G3V2T6 193 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 KLF4O43474 513 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 IDH3BO43837 385 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 AHCYL1O43865 530 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 PAX7P23759 505 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 NOS3P29474 1203 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 GUCA1AP43080 201 aaPredicted RBP10.44□□□□□ -0.74
SNCA-202ENST00000345009 GSSP48637 474 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 PPP1R8Q12972 351 aaKnown RBP10.44□□□□□ -0.74
SNCA-202ENST00000345009 CAMK2DQ13557 499 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 RFX4Q33E94 735 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 CARD17Q5XLA6 110 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 CRYBG3Q68DQ2 2970 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 ZNF770Q6IQ21 691 aaPredicted RBP10.44□□□□□ -0.74
SNCA-202ENST00000345009 SHQ1Q6PI26 577 aaKnown RBP10.44□□□□□ -0.74
SNCA-202ENST00000345009 NHLRC1Q6VVB1 395 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 RASSF6Q6ZTQ3 369 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 LSRQ86X29 649 aaPredicted RBP10.44□□□□□ -0.74
SNCA-202ENST00000345009 ZDHHC13Q8IUH4 622 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 DMRTC2Q8IXT2 367 aaPredicted RBP10.44□□□□□ -0.74
SNCA-202ENST00000345009 SVOPLQ8N434 492 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 ATG16L2Q8NAA4 619 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 C1orf162Q8NEQ5 155 aaPredicted RBP10.44□□□□□ -0.74
SNCA-202ENST00000345009 OR9Q2Q8NGE9 314 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 OR5K1Q8NHB7 308 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 FANK1Q8TC84 345 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 PYDC1Q8WXC3 89 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 DNAJC9Q8WXX5 260 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 HSD17B8Q92506 261 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 CENPNQ96H22 339 aaPredicted RBP10.44□□□□□ -0.74
SNCA-202ENST00000345009 FEVQ99581 238 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 KATNB1Q9BVA0 655 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 TEX12Q9BXU0 123 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 DGCR6LQ9BY27 220 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 ULBP2Q9BZM5 246 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 CRLF2Q9HC73 371 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 GLTPQ9NZD2 209 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 KIF17Q9P2E2 1029 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 KCNN3Q9UGI6 736 aa10.44□□□□□ -0.74
SNCA-202ENST00000345009 SH3D21A4FU49 640 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ERICH4A6NGS2 130 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 POM121CA8CG34 1229 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 RPL36A-HNRNPH2H7BZ11 118 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 C19orf84I3L1E1 186 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 M0R3G1 203 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 UPK3AO75631 287 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 LYZL6O75951 148 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 IGHMP01871 453 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 EPXP11678 715 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 APEHP13798 732 aaKnown RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 ACADSP16219 412 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 IGFBP2P18065 325 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 COX5AP20674 150 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 IGHV1-2P23083 117 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 GRNP28799 593 aaKnown RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 ACVR1BP36896 505 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ERVK-25P63136 954 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ROR2Q01974 943 aaKnown RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 TOP3AQ13472 1001 aaPredicted RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 STK11Q15831 433 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 LCE2CQ5TA81 110 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 KLHL24Q6TFL4 600 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 CD300LDQ6UXZ3 194 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 CCDC36Q8IYA8 594 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 TMEM123Q8N131 208 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 C17orf78Q8N4C9 275 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ZNF433Q8N7K0 673 aaPredicted RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 CLDN22Q8N7P3 220 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ARIH2OSQ8N7S6 290 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ASB10Q8WXI3 467 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 GTPBP3Q969Y2 492 aaKnown RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 GPX7Q96SL4 187 aaPredicted RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 ALG12Q9BV10 488 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 IFT27Q9BW83 186 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 OSBPL10Q9BXB5 764 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ACTR6Q9GZN1 396 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 OR52D1Q9H346 318 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 MOV10Q9HCE1 1003 aaKnown RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 NRIP3Q9NQ35 241 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ENOPH1Q9UHY7 261 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ZNF346Q9UL40 294 aaKnown RBP10.43□□□□□ -0.74
SNCA-202ENST00000345009 BAIAP2Q9UQB8 552 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 POFUT2Q9Y2G5 429 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 CDH10Q9Y6N8 788 aa10.43□□□□□ -0.74
SNCA-202ENST00000345009 ASH1LQ9NR48 2969 aaKnown RBP10.42□□□□□ -0.74
SNCA-202ENST00000345009 HCFC1P51610 2035 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 IMPA2O14732 288 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ARHGEF9O43307 516 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 MGRN1O60291 552 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms