RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 RASSF1Q9NS23 344 aa12.21□□□□□ -0.45
TPM4-202ENST00000344824 MCIDASD6RGH6 385 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 PTP4A3O75365 173 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 NDUFB2O95178 105 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 PPP1R3DO95685 299 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 F13BP05160 661 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 GNAO1P09471 354 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 ADORA3P0DMS8 318 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 AHCYP23526 432 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 ADARB1P78563 741 aaKnown RBP12.2□□□□□ -0.46
TPM4-202ENST00000344824 RPL18Q07020 188 aaKnown RBP12.2□□□□□ -0.46
TPM4-202ENST00000344824 FHL1Q13642 323 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 MFSD13AQ14CX5 517 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 TSC22D1Q15714 1073 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 TTC23Q5W5X9 447 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 ABLIM2Q6H8Q1 611 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 TFAP2EQ6VUC0 442 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 CDC20BQ86Y33 519 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 CCDC103Q8IW40 242 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 ZNF100Q8IYN0 542 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 KDM8Q8N371 416 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 CLDN22Q8N7P3 220 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 TMEM99Q8N816 258 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 OR4Q3Q8NH05 313 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 OR6S1Q8NH40 331 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 FAM81AQ8TBF8 368 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 LIPHQ8WWY8 451 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 TFAP2CQ92754 450 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 DACH2Q96NX9 599 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 WFIKKN1Q96NZ8 548 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 Q9H521 79 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 ZNF226Q9NYT6 803 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 EMC3Q9P0I2 261 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 RAB26Q9ULW5 256 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 ZAR1LA6NP61 321 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 ZNF814B7Z6K7 855 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 RNF13O43567 381 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 IL32P24001 234 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 SLC6A6P31641 620 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 RPS4XP62701 263 aaKnown RBP12.2□□□□□ -0.46
TPM4-202ENST00000344824 SLC35A1P78382 337 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 TOP3AQ13472 1001 aaPredicted RBP12.2□□□□□ -0.46
TPM4-202ENST00000344824 PGGHGQ32M88 737 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 ALG10Q5BKT4 473 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 RPL13AP3Q6NVV1 102 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 SLC27A4Q6P1M0 643 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 CXorf67Q86X51 503 aaPredicted RBP12.2□□□□□ -0.46
TPM4-202ENST00000344824 WFDC8Q8IUA0 241 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 UBE2J2Q8N2K1 259 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 PIK3IP1Q96FE7 263 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 NAA11Q9BSU3 229 aaPredicted RBP12.2□□□□□ -0.46
TPM4-202ENST00000344824 BCO1Q9HAY6 547 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
TPM4-202ENST00000344824 IL20Q9NYY1 176 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 PRSS50Q9UI38 385 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 HIF3AQ9Y2N7 669 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 NOSIPQ9Y314 301 aaKnown RBP12.2□□□□□ -0.46
TPM4-202ENST00000344824 CORINQ9Y5Q5 1042 aa12.2□□□□□ -0.46
TPM4-202ENST00000344824 AKAP9Q99996 3911 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 H0YAE9 185 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 PLPP3O14495 311 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 SLC16A6O15403 523 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 RAMP1O60894 148 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 IGHV3-9P01782 118 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 GGT2P36268 569 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 GIPRP48546 466 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 CTXN1P60606 82 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 PRPS1P60891 318 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 ERVK-25P63136 954 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 CDK5Q00535 292 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 IL5RAQ01344 420 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 DAZAP2Q15038 168 aaPredicted RBP12.19□□□□□ -0.46
TPM4-202ENST00000344824 SLC35F1Q5T1Q4 408 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 ACSM5Q6NUN0 579 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 CASP12Q6UXS9 341 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 STAC2Q6ZMT1 411 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 H1FNTQ75WM6 255 aaPredicted RBP12.19□□□□□ -0.46
TPM4-202ENST00000344824 GPAT4Q86UL3 456 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 OR2T33Q8NG76 320 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 MUS81Q96NY9 551 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 ERMAPQ96PL5 475 aaPredicted RBP12.19□□□□□ -0.46
TPM4-202ENST00000344824 PITX2Q99697 317 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 KATNB1Q9BVA0 655 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 NDEL1Q9GZM8 345 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 ACTR6Q9GZN1 396 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 LIME1Q9H400 295 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 GP6Q9HCN6 339 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 TAS2R5Q9NYW4 299 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 TVP23BQ9NYZ1 205 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 ING1Q9UK53 422 aaPredicted RBP12.19□□□□□ -0.46
TPM4-202ENST00000344824 NDRG4Q9ULP0 352 aaKnown RBP12.19□□□□□ -0.46
TPM4-202ENST00000344824 TRAPPC4Q9Y296 219 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 PLEKHA6Q9Y2H5 1048 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 ADAM18Q9Y3Q7 739 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 IER3IP1Q9Y5U9 82 aa12.19□□□□□ -0.46
TPM4-202ENST00000344824 OTOGQ6ZRI0 2925 aa12.18□□□□□ -0.46
TPM4-202ENST00000344824 ROS1P08922 2347 aa12.18□□□□□ -0.46
TPM4-202ENST00000344824 DNPH1O43598 174 aa12.18□□□□□ -0.46
TPM4-202ENST00000344824 EIF1BO60739 113 aaKnown RBP12.18□□□□□ -0.46
TPM4-202ENST00000344824 EDNRAP25101 427 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms