RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SIRT6Q8N6T7 355 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 MFSD9Q8NBP5 474 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 FAM71CQ8NEG0 241 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ABHD1Q96SE0 405 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 AUNIPQ9H7T9 357 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 NPIPB8E9PQR5 432 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF593O00488 134 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SIGLEC6O43699 453 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PLGP00747 810 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 F13BP05160 661 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 F3P13726 295 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SDHAP31040 664 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PLCXD2Q0VAA5 305 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 SOHLH1Q5JUK2 328 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM81Q6P7N7 255 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 ADAMTSL4Q6UY14 1074 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 LILRB2Q8N423 598 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 LNX2Q8N448 690 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 FAM160A2Q8N612 972 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 GLYATL2Q8WU03 294 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 WDR89Q96FK6 387 aaPredicted RBP4.41□□□□□ -1.7
CSMD3-203ENST00000343508 PEX11GQ96HA9 241 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 WASF3Q9UPY6 502 aa4.41□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM269A0A1B0GVZ9 245 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 RFPL4AA6NLU0 287 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 RFPL4AL1F8VTS6 287 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 NDUFB6O95139 128 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 BPNT1O95861 308 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 CTSLP07711 333 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 FBXO45P0C2W1 286 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 PTAFRP25105 342 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 EOGTQ5NDL2 527 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 ABHD17CQ6PCB6 329 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 PARS2Q7L3T8 475 aaKnown RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 SLC17A9Q9BYT1 436 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 FLVCR2Q9UPI3 526 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 THSD7AQ9UPZ6 1657 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 ANKRD20A5PA0PJZ0 165 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 NNATQ16517 81 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 MPEG1Q2M385 716 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 LINC00303Q3SY05 128 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 CCSMST1Q4G0I0 132 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 DPY19L4Q7Z388 723 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 PLPP7Q8NBV4 271 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 RAB39BQ96DA2 213 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 C14orf79Q96F83 325 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 B3GALT1Q9Y5Z6 326 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 A0A0J9YY10 115 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 B4DGG1 531 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 RPL23AP62750 156 aaKnown RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 ZC3H14Q6PJT7 736 aaKnown RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 BEND4Q6ZU67 534 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 BAP18Q8IXM2 172 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 PRSS35Q8N3Z0 413 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 MS4A6EQ96DS6 147 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 RRNAD1Q96FB5 475 aaKnown RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 MIXL1Q9H2W2 232 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 PCM1Q15154 2024 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 CIB4A0PJX0 185 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 GSTZ1O43708 216 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 SERPINA5P05154 406 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 ACHEP22303 614 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 PDSS1Q5T2R2 415 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 ABI3BPQ7Z7G0 1075 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 MRPL41Q8IXM3 137 aaKnown RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 BVESQ8NE79 360 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 DVL3Q92997 716 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 SGIP1Q9BQI5 828 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 PDE7BQ9NP56 450 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 GJE1A6NN92 205 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 PPP1R2P9O14990 202 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 CYBAP13498 195 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 GDI1P31150 447 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 POLR2HP52434 150 aaKnown RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 SRPXP78539 464 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 C2orf27AQ580R0 203 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 LIPNQ5VXI9 398 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 OR7E24Q6IFN5 339 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 ABHD12BQ7Z5M8 362 aaPredicted RBP4.4□□□□□ -1.7
CSMD3-203ENST00000343508 LYG2Q86SG7 212 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 BBS1Q8NFJ9 593 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 OR9K2Q8NGE7 335 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 OR6K3Q8NGY3 331 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 FOXJ1Q92949 421 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 GPATCH2Q9NW75 528 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 NEU3Q9UQ49 428 aa4.4□□□□□ -1.7
CSMD3-203ENST00000343508 NUMA1Q14980 2115 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 DCTN6O00399 190 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 HOXB5P09067 269 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF43P17038 809 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SOX18P35713 384 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 TAGLN2P37802 199 aaKnown RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 UBE2KP61086 200 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PMPCAQ10713 525 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SLC25A35Q3KQZ1 300 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM128Q5BJH2 165 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 TMEM229BQ8NBD8 167 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SLC52A3Q9NQ40 469 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 IGLV3-16A0A075B6K0 115 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms