RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SC5DO75845 299 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 DXOO77932 396 aaKnown RBP16.77■□□□□ 0.27
HOXA9-201ENST00000343483 STK17BO94768 372 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 IL11P20809 199 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 OR10A3P58181 314 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 SIRPAP78324 504 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 RIN1Q13671 783 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 EXT1Q16394 746 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 SFXN4Q6P4A7 337 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 SLC16A9Q7RTY1 509 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 RDH10Q8IZV5 341 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 MS4A15Q8N5U1 240 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 OR13C5Q8NGS8 318 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 KCTD12Q96CX2 325 aaKnown RBP16.77■□□□□ 0.27
HOXA9-201ENST00000343483 ARL5BQ96KC2 179 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 IMMP1LQ96LU5 166 aa16.77■□□□□ 0.27
HOXA9-201ENST00000343483 KRT8P05787 483 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 PSMB10P40306 273 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 KIR2DL3P43628 341 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 NKX2-5P52952 324 aaPredicted RBP16.76■□□□□ 0.27
HOXA9-201ENST00000343483 CLDN6P56747 220 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 RPL27P61353 136 aaKnown RBP16.76■□□□□ 0.27
HOXA9-201ENST00000343483 OR7A5Q15622 319 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 INPP5JQ15735 1006 aaPredicted RBP16.76■□□□□ 0.27
HOXA9-201ENST00000343483 PLA2G2CQ5R387 149 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 IL20RBQ6UXL0 311 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 NCCRP1Q6ZVX7 275 aaPredicted RBP16.76■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF221Q9UK13 617 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 RASD1Q9Y272 281 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 PCNX3Q9H6A9 2034 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 EXPH5Q8NEV8 1989 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 CEP250Q9BV73 2442 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 PMS2P1A4D2B8 440 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 H3BML4 177 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 TFPIP10646 304 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 MSX1P28360 303 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 MAP2K3P46734 347 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 GDI2P50395 445 aaKnown RBP16.76■□□□□ 0.27
HOXA9-201ENST00000343483 HSF2Q03933 536 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 CDK5R1Q15078 307 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 PRAMEF20Q5VT98 475 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 KDM8Q8N371 416 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 OR11G2Q8NGC1 345 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 OR6F1Q8NGZ6 308 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 DDIT4LQ96D03 193 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 SMIM19Q96E16 107 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 STRADBQ9C0K7 418 aa16.76■□□□□ 0.27
HOXA9-201ENST00000343483 MRPL39Q9NYK5 338 aaKnown RBP16.76■□□□□ 0.27
HOXA9-201ENST00000343483 TRBV2A0A0J9YWF9 115 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 FTCDNL1E5RQL4 147 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 OGG1O15527 345 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 DKK1O94907 266 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 SERPINA3P01011 423 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 PRKAR1AP10644 381 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 EDNRAP25101 427 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 THBS2P35442 1172 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 INPP1P49441 399 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 EEF1A1P5Q5VTE0 462 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 MZT2BQ6NZ67 158 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 LRRC28Q86X40 367 aaPredicted RBP16.75■□□□□ 0.27
HOXA9-201ENST00000343483 TIGD4Q8IY51 512 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 UBL7Q96S82 380 aaPredicted RBP16.75■□□□□ 0.27
HOXA9-201ENST00000343483 TTYH2Q9BSA4 534 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 TXNIPQ9H3M7 391 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF160Q9HCG1 818 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 PISDQ9UG56 409 aa16.75■□□□□ 0.27
HOXA9-201ENST00000343483 NSG1A0A0A6YYJ2 146 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 PRR32B1ATL7 298 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 TP53I11O14683 189 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 TRIM3O75382 744 aaPredicted RBP16.74■□□□□ 0.27
HOXA9-201ENST00000343483 GPANK1O95872 356 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 TALDO1P37837 337 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 NR4A2P43354 598 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 MELKQ14680 651 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 PLPPR5Q32ZL2 321 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 RAB11FIP2Q7L804 512 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 SAMD12Q8N8I0 201 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 TEX19Q8NA77 164 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 ZNF519Q8TB69 540 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 NXPE2Q96DL1 559 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 ADAD1Q96M93 576 aaKnown RBP16.74■□□□□ 0.27
HOXA9-201ENST00000343483 FRMD6Q96NE9 622 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 RNF121Q9H920 327 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 FBXL2Q9UKC9 423 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 KLHDC2Q9Y2U9 406 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 CHCHD2Q9Y6H1 151 aaPredicted RBP16.74■□□□□ 0.27
HOXA9-201ENST00000343483 IGLV3-32A0A0A0MS00 114 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 A0A0G2JK05 382 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 A0A0G2JMP0 313 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 A0A0X1KG70 313 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 PRSS37A4D1T9 235 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 EIF4EP06730 217 aaKnown RBP16.74■□□□□ 0.27
HOXA9-201ENST00000343483 CENPAP49450 140 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 RPS18P62269 152 aaKnown RBP16.74■□□□□ 0.27
HOXA9-201ENST00000343483 PUDPQ08623 228 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 ATAD3CQ5T2N8 411 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 RPL22L1Q6P5R6 122 aaKnown RBP16.74■□□□□ 0.27
HOXA9-201ENST00000343483 PAMR1Q6UXH9 720 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 OR4M2Q8NGB6 313 aa16.74■□□□□ 0.27
HOXA9-201ENST00000343483 OR6N2Q8NGY6 317 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms