RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PRAMEF11O60813 436 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 S1PR4O95977 384 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 GGT5P36269 586 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 GPR12P47775 334 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 TMUB2Q71RG4 321 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 CMTM8Q8IZV2 173 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 C8orf33Q9H7E9 229 aaPredicted RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 OBP2AQ9NY56 170 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF727A8MUV8 499 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 ZFAND5O76080 213 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 GSCP56915 257 aaPredicted RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 SLC35A1P78382 337 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 NR0B2Q15466 257 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 APOBEC3HQ6NTF7 200 aaKnown RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 SFXN1Q9H9B4 322 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 CSNK1G3Q9Y6M4 447 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 XRN1Q8IZH2 1706 aaKnown RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 M0R2Z0 102 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 TPOP07202 933 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 HSD17B1P14061 328 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 DHRS7BQ6IAN0 325 aaPredicted RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 VASH2Q86V25 355 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF547Q8IVP9 402 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 C11orf49Q9H6J7 331 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 PELI2Q9HAT8 420 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 LOC100289279A0A1B0GTE1 492 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 LEFTY1O75610 366 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 EDDM3BP56851 147 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 NTN4Q9HB63 628 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 GPR171O14626 319 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 SSSCA1O60232 199 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 GM2AP17900 193 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 PBX1P40424 430 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 RPS23P62266 143 aaKnown RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 GPR119Q8TDV5 335 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 OR4C12Q96R67 309 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 CNIH4Q9P003 139 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 OR6C76A6NM76 312 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 TCTAP57738 103 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 DTWD2Q8NBA8 298 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 ARRDC3Q96B67 414 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 A6NDN8 102 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 KDM4EB2RXH2 506 aaPredicted RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 MPGP29372 298 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 BLVRBP30043 206 aaPredicted RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 SIM1P81133 766 aaPredicted RBP16.39■□□□□ 0.21
SMAD4-201ENST00000342988 TFAP2EQ6VUC0 442 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 MFSD9Q8NBP5 474 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 SCARB1Q8WTV0 552 aa16.39■□□□□ 0.21
SMAD4-201ENST00000342988 HSBP1O75506 76 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 Q3ZCU0 254 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 FCRLAQ7L513 359 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 PARP16Q8N5Y8 322 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 GPR32P1Q8NGA4 272 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 CAPNS2Q96L46 248 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 MED17Q9NVC6 651 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 MED12Q93074 2177 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 RRASP10301 218 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 BMP2P12643 396 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF343Q6P1L6 599 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 LYSMD1Q96S90 227 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 NRIP3Q9NQ35 241 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 FBXL2Q9UKC9 423 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 PIGLQ9Y2B2 252 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 FAM171A2A8MVW0 826 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 PSMB1P20618 241 aaKnown RBP16.38■□□□□ 0.21
SMAD4-201ENST00000342988 MAOBP27338 520 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 ETV3P41162 512 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 VASPP50552 380 aaPredicted RBP16.38■□□□□ 0.21
SMAD4-201ENST00000342988 TEAD2Q15562 447 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 C18orf63Q68DL7 685 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 OR2L13Q8N349 312 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF561Q8N587 486 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 KCNK15Q9H427 330 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 COX7A2P2O60397 106 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 NSG1A0A0A6YYJ2 146 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 CXorf49A8MYA2 514 aaPredicted RBP16.38■□□□□ 0.21
SMAD4-201ENST00000342988 MUC15Q8N387 334 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 TCTEX1D1Q8N7M0 179 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 EDEM2Q9BV94 578 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 SPACA1Q9HBV2 294 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 MOKQ9UQ07 419 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 ARHGEF28Q8N1W1 1705 aaKnown RBP16.38■□□□□ 0.21
SMAD4-201ENST00000342988 A6NL46 340 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 ATP6V1FQ16864 119 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 NXPE3Q969Y0 559 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 ENTPD2Q9Y5L3 495 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 FBXO45P0C2W1 286 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 OR5G3P0C626 314 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 UNGP13051 313 aaPredicted RBP16.38■□□□□ 0.21
SMAD4-201ENST00000342988 SPCS3P61009 180 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 TMEM163Q8TC26 289 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 WWTR1Q9GZV5 400 aa16.38■□□□□ 0.21
SMAD4-201ENST00000342988 MAGI3Q5TCQ9 1506 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF487B1APH4 448 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 STAG3L3P0CL85 134 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 SCGB1D4Q6XE38 83 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 GRASPQ7Z6J2 395 aaPredicted RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ADGRE4PQ86SQ3 457 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 OR4F15Q8NGB8 312 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms