RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 FAIM2Q9BWQ8 316 aa8.94□□□□□ -0.98
ATXN3-201ENST00000340660 LINC00470Q9BZP3 86 aa8.94□□□□□ -0.98
ATXN3-201ENST00000340660 CDIP1Q9H305 208 aa8.94□□□□□ -0.98
ATXN3-201ENST00000340660 EQTNQ9NQ60 294 aa8.94□□□□□ -0.98
ATXN3-201ENST00000340660 DDX18Q9NVP1 670 aaKnown RBP8.94□□□□□ -0.98
ATXN3-201ENST00000340660 ZNF224Q9NZL3 707 aa8.94□□□□□ -0.98
ATXN3-201ENST00000340660 ZNF256Q9Y2P7 627 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-201ENST00000340660 CAB39Q9Y376 341 aaPredicted RBP8.94□□□□□ -0.98
ATXN3-201ENST00000340660 EIF1BO60739 113 aaKnown RBP8.93□□□□□ -0.98
ATXN3-201ENST00000340660 PEX14O75381 377 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 LCKP06239 509 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 PTMAP06454 111 aaKnown RBP8.93□□□□□ -0.98
ATXN3-201ENST00000340660 DRD4P21917 467 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 IFT88Q13099 833 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 OR4D1Q15615 310 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 NPTX1Q15818 432 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 MOGQ16653 247 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 CEACAM16Q2WEN9 425 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 TMEM95Q3KNT9 176 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 KLHL26Q53HC5 615 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 LIPJQ5W064 366 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 TEPPQ6URK8 271 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 CCDC89Q8N998 374 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 SLC7A13Q8TCU3 470 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 ST8SIA1Q92185 356 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 TMEM246Q9BRR3 403 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 NAA11Q9BSU3 229 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-201ENST00000340660 SHCBP1LQ9BZQ2 653 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 TMPRSS5Q9H3S3 457 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 RMND5AQ9H871 391 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 GPR35Q9HC97 309 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 RAB18Q9NP72 206 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 SLC35C2Q9NQQ7 365 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 CTPS2Q9NRF8 586 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 CD274Q9NZQ7 290 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 TMEM181Q9P2C4 612 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 CHRNA9Q9UGM1 479 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 TRAPPC4Q9Y296 219 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 GPR45Q9Y5Y3 372 aa8.93□□□□□ -0.98
ATXN3-201ENST00000340660 MAGEB16A2A368 324 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 C9orf118A6NHY6 69 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 TMEM178BH3BS89 294 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 PHYHO14832 338 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 SYNGR1O43759 233 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 JUNP05412 331 aaKnown RBP8.92□□□□□ -0.98
ATXN3-201ENST00000340660 CETN2P41208 172 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 THBS3P49746 956 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 TERF1P54274 439 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 SLC35A1P78382 337 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 PRB3Q04118 309 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-201ENST00000340660 CBFBQ13951 182 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 RBM43Q6ZSC3 357 aaKnown RBP8.92□□□□□ -0.98
ATXN3-201ENST00000340660 DTX3Q8N9I9 347 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 ICA1LQ8NDH6 482 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 OR6Y1Q8NGX8 325 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 C8orf49Q96NF6 230 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 SSX3Q99909 188 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 CCDC106Q9BWC9 280 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 SF3B5Q9BWJ5 86 aaKnown RBP8.92□□□□□ -0.98
ATXN3-201ENST00000340660 C1QTNF3Q9BXJ4 246 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 CDCA4Q9BXL8 241 aa8.92□□□□□ -0.98
ATXN3-201ENST00000340660 A0A1W2PRD5 423 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 A0A1W2PRF3 423 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 A0A1W2PRM7 423 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 TTC36A6NLP5 189 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 K7EPI3 171 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 GTPBP1O00178 669 aaKnown RBP8.91□□□□□ -0.98
ATXN3-201ENST00000340660 LDLRAD4O15165 306 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 AKR1B10O60218 316 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 PAHP00439 452 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 IL3P08700 152 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 ACP2P11117 423 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 CCL2P13500 99 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 TNFRSF1AP19438 455 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 LCN1P31025 176 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 LSP1P33241 339 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 MPIP34949 423 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 TNFAIP6P98066 277 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-201ENST00000340660 CDK16Q00536 496 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 RBBP4Q09028 425 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 TBX2Q13207 712 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-201ENST00000340660 LYPD2Q6UXB3 125 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 LRIG3Q6UXM1 1119 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 GPAT4Q86UL3 456 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 RNF130Q86XS8 419 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 PTOV1Q86YD1 416 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 TMEM99Q8N816 258 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 NPRL2Q8WTW4 380 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 THUMPD3Q9BV44 507 aaKnown RBP8.91□□□□□ -0.98
ATXN3-201ENST00000340660 KCNK9Q9NPC2 374 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 GIN1Q9NXP7 522 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 AHSPQ9NZD4 102 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 OPTCQ9UBM4 332 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 RNF14Q9UBS8 474 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 RNF11Q9Y3C5 154 aa8.91□□□□□ -0.98
ATXN3-201ENST00000340660 PLSCR5A0PG75 271 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 ESRRBO95718 433 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 LIPFP07098 398 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 ZNF20P17024 532 aa8.9□□□□□ -0.98
ATXN3-201ENST00000340660 MPV17P39210 176 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms