RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 OGG1O15527 345 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 TBX1O43435 398 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 GPRIN2O60269 458 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 ICAM2P13598 275 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 FKBP2P26885 142 aaKnown RBP13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 GRPRP30550 384 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 SOX8P57073 446 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 RPL27P61353 136 aaKnown RBP13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 DEFB109BQ30KR1 87 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 MESTQ5EB52 335 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 SLC25A53Q5H9E4 307 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 LINC01590Q5TEZ4 76 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 INO80CQ6PI98 192 aaPredicted RBP13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 LYPD8Q6UX82 237 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 EXD3Q8N9H8 876 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 THOC3Q96J01 351 aaKnown RBP13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 RASL10BQ96S79 203 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 KLHDC3Q9BQ90 382 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 POTEKPQ9BYX7 375 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 TXNIPQ9H3M7 391 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 TAS2R5Q9NYW4 299 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 PLEKHB1Q9UF11 243 aaPredicted RBP13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 GNG8Q9UK08 70 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 KCNMB2Q9Y691 235 aa13.68□□□□□ -0.22
TUBB4B-201ENST00000340384 A6NIZ1 184 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 HSPB2A8KAH6 182 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 SELENOFO60613 162 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 CLEC2LP0C7M8 214 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 TGM4P49221 684 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 RAP1BP61224 184 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 RAP1AP62834 184 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 SIRPAP78324 504 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 SLC3A1Q07837 685 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 ZP4Q12836 540 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 AIMP2Q13155 320 aaKnown RBP13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 CDK5R1Q15078 307 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 HSPB2Q16082 182 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 TP53I3Q53FA7 332 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 EEF1A1P5Q5VTE0 462 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 FAM205BPQ63HN1 556 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 TMEM81Q6P7N7 255 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 TMEM91Q6ZNR0 172 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 LSRQ86X29 649 aaPredicted RBP13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 LYSMD2Q8IV50 215 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 GHDCQ8N2G8 530 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 TEX19Q8NA77 164 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 SYT14Q8NB59 555 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 ABHD4Q8TB40 342 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 ZPLD1Q8TCW7 415 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 PHYHIPQ92561 330 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 SMIM19Q96E16 107 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 FER1L6-AS2Q96M78 137 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 PTGES2Q9H7Z7 377 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 MED11Q9P086 117 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 ST6GALNAC2Q9UJ37 374 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 FKBP7Q9Y680 259 aa13.67□□□□□ -0.22
TUBB4B-201ENST00000340384 DOCK10Q96BY6 2186 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 NPIPB13A6NJU9 1138 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 NPIPB4C9JG80 1138 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 C11orf98E9PRG8 122 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 PLPP3O14495 311 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 ARHGEF9O43307 516 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 GATBO75879 557 aaKnown RBP13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 ARL6IP5O75915 188 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 AHCYP23526 432 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 ACVR1BP36896 505 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 GDI2P50395 445 aaKnown RBP13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 SSX6Q7RTT6 188 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 GALNT16Q8N428 558 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 OR10G3Q8NGC4 313 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 ASB15Q8WXK1 588 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 KCTD12Q96CX2 325 aaKnown RBP13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 PELI1Q96FA3 418 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 KLHL15Q96M94 604 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 CDCP1Q9H5V8 836 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 GALNT9Q9HCQ5 603 aa13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 SIRT4Q9Y6E7 314 aaPredicted RBP13.66□□□□□ -0.22
TUBB4B-201ENST00000340384 PTPRQQ9UMZ3 2332 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 C17orf51A8MQB3 221 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 E9PI62 339 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 LRRTM2O43300 516 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 SLC19A2O60779 497 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 ITGA10O75578 1167 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 PTTG1O95997 202 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 APOA1P02647 267 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 KRT8P05787 483 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 EDNRAP25101 427 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 PTBP1P26599 531 aaKnown RBP eCLIP13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 DAP3P51398 398 aaKnown RBP13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 MLF1P58340 268 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 IFITM3Q01628 133 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 ZNF468Q5VIY5 522 aaPredicted RBP13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 C1QL3Q5VWW1 255 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 OR5M10Q6IEU7 315 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 DNM1P34Q6PK57 102 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 METAP1DQ6UB28 335 aaPredicted RBP13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 CEACAM19Q7Z692 300 aa13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 RPS19BP1Q86WX3 136 aaKnown RBP13.65□□□□□ -0.22
TUBB4B-201ENST00000340384 LAX1Q8IWV1 398 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms