RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 CLRN1P58418 232 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 RAP1BP61224 184 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 RAP1AP62834 184 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.11□□□□□ -0.31
CSRP1-201ENST00000340006 SMN1Q16637 294 aaKnown RBP13.11□□□□□ -0.31
CSRP1-201ENST00000340006 HDDC2Q7Z4H3 204 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 RPRMLQ8N4K4 120 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 ASB10Q8WXI3 467 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF566Q969W8 418 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 SLC25A44Q96H78 314 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-201ENST00000340006 ADAD1Q96M93 576 aaKnown RBP13.11□□□□□ -0.31
CSRP1-201ENST00000340006 NMNAT3Q96T66 252 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 BCO1Q9HAY6 547 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 KLHL21Q9UJP4 597 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 ING1Q9UK53 422 aaPredicted RBP13.11□□□□□ -0.31
CSRP1-201ENST00000340006 GPR52Q9Y2T5 361 aa13.11□□□□□ -0.31
CSRP1-201ENST00000340006 PHF3Q92576 2039 aaKnown RBP13.1□□□□□ -0.31
CSRP1-201ENST00000340006 IGKV3D-15A0A087WSY6 115 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 SURF4O15260 269 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 XPNPEP2O43895 674 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 CCDC159P0C7I6 412 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF3P17036 446 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 TIMP3P35625 211 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 CDKN2AP42771 156 aaKnown RBP13.1□□□□□ -0.31
CSRP1-201ENST00000340006 PCYT1AP49585 367 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 CXCR4P61073 352 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 SIRPAP78324 504 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 KRR1Q13601 381 aaKnown RBP13.1□□□□□ -0.31
CSRP1-201ENST00000340006 ARMC4Q5T2S8 1044 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 LEG1Q6P5S2 330 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 NHLRC1Q6VVB1 395 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF100Q8IYN0 542 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF843Q8N446 348 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 CYB561A3Q8NBI2 242 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 SDR9C7Q8NEX9 313 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 TSPAN14Q8NG11 270 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 OR8J1Q8NGP2 316 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 OR6X1Q8NH79 312 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 PRR7Q8TB68 274 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 TRUB1Q8WWH5 349 aaKnown RBP13.1□□□□□ -0.31
CSRP1-201ENST00000340006 RERGLQ9H628 205 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 C12orf49Q9H741 205 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 GP6Q9HCN6 339 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 H2AFY2Q9P0M6 372 aaPredicted RBP13.1□□□□□ -0.31
CSRP1-201ENST00000340006 BLOC1S6Q9UL45 172 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 EMC9Q9Y3B6 208 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 MYO7BQ6PIF6 2116 aa13.1□□□□□ -0.31
CSRP1-201ENST00000340006 NBASA2RRP1 2371 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 MBD3L4A6NDZ8 208 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 MBD3L3A6NE82 208 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 TRIM64A6NGJ6 449 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 MBD3L5A6NJ08 208 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 NPIPB13A6NJU9 1138 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 NPIPB4C9JG80 1138 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 H7C1C5 153 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 PRKYO43930 277 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 TRMUO75648 421 aaKnown RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 KRT33AO76009 404 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 TXNDC12O95881 172 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 RENP00797 406 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 IGHG1P01857 330 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 IGHMP01871 453 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 SMIM18P0DKX4 95 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 GLI4P10075 376 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 SELENOPP49908 381 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 CDH15P55291 814 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 LCN6P62502 163 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 RUNX1T1Q06455 604 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 EIF2S3LQ2VIR3 472 aaKnown RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 SOWAHCQ53LP3 525 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 FAM205BPQ63HN1 556 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 FAM214BQ7L5A3 538 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 OR6N1Q8NGY5 312 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 MBD3L2Q8NHZ7 208 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 RBP7Q96R05 134 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 SRA1Q9HD15 236 aaKnown RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 CMC2Q9NRP2 79 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 FAM183AA6NL82 134 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 PRR23D1E9PI22 279 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 CCL21O00585 134 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 PRR23D2P0DMB1 279 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 TMIGD3P0DMS9 266 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 ATP6V1B1P15313 513 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 PAICSP22234 425 aaKnown RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 EEF1B2P24534 225 aaKnown RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 NTF4P34130 210 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 SNRPGP62308 76 aaKnown RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 TEKQ02763 1124 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 MESTQ5EB52 335 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 TMEM211Q6ICI0 200 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 SEM1Q6ZVN7 128 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 NUFIP2Q7Z417 695 aaKnown RBP13.09□□□□□ -0.31
CSRP1-201ENST00000340006 ATCAYQ86WG3 371 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 UBE2J2Q8N2K1 259 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 ZNF519Q8TB69 540 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 ETAA1Q9NY74 926 aa13.09□□□□□ -0.31
CSRP1-201ENST00000340006 ESPL1Q14674 2120 aa13.08□□□□□ -0.32
CSRP1-201ENST00000340006 E9PLN8 166 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms