RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 GPER1Q99527 375 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 C19orf53Q9UNZ5 99 aaPredicted RBP12.92□□□□□ -0.34
PCDH8-201ENST00000338862 CHD7Q9P2D1 2997 aa12.92□□□□□ -0.34
PCDH8-201ENST00000338862 A0A0B4J2A0 478 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 SEC14L5O43304 696 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 PVALBP20472 110 aaPredicted RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 CDKN2AP42771 156 aaKnown RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 MLC1Q15049 377 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 TMEM52BQ4KMG9 183 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 C3orf33Q6P1S2 294 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 BPIFB2Q8N4F0 458 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF615Q8N8J6 731 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 AVL9Q8NBF6 648 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 C5orf34Q96MH7 638 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 C7orf50Q9BRJ6 194 aaKnown RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 SHPKQ9UHJ6 478 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 ST6GALNAC2Q9UJ37 374 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 KCNG2Q9UJ96 466 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 TCF20Q9UGU0 1960 aaKnown RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 TMEM82A0PJX8 343 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 SCDO00767 359 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 CTSBP07858 339 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 GPR143P51810 404 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 BDH1Q02338 343 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 ALKBH1Q13686 389 aaKnown RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 AGBL4Q5VU57 503 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 TMEM205Q6UW68 189 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF550Q7Z398 422 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 RASGRP3Q8IV61 690 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 LINC00346Q8IVM7 164 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 SCARB1Q8WTV0 552 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 VRK1Q99986 396 aaPredicted RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 SEC61A2Q9H9S3 476 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 PTTG3PQ9NZH4 202 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 FOXJ3Q9UPW0 622 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 MRPS33Q9Y291 106 aaKnown RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 TRPM7Q96QT4 1865 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 C17orf51A8MQB3 221 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 ATG12O94817 140 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 CXCL10P02778 98 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 NMBP08949 121 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 AKAIN1P0CW23 69 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 VSIG10L2P0DP72 767 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 MAPK3P27361 379 aaPredicted RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 AVPR2P30518 371 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 IGFALSP35858 605 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 PWWP2BQ6NUJ5 590 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 BAIAP2L2Q6UXY1 529 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 MDGA2Q7Z553 956 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF584Q8IVC4 421 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 PXT1Q8NFP0 134 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 NPRL2Q8WTW4 380 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 CCDC107Q8WV48 283 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF649Q9BS31 505 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 HRH4Q9H3N8 390 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 PRTFDC1Q9NRG1 225 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 PLXNA3P51805 1871 aa12.91□□□□□ -0.34
PCDH8-201ENST00000338862 MDC1Q14676 2089 aaKnown RBP12.91□□□□□ -0.34
PCDH8-201ENST00000338862 A0A1B0GUH1 482 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 PRAMEF2O60811 474 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 PPM1BO75688 479 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 GIPP09681 153 aaPredicted RBP12.9□□□□□ -0.34
PCDH8-201ENST00000338862 DIO1P49895 249 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 TFF2Q03403 129 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 SLC25A38Q96DW6 304 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 SLC38A3Q99624 504 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 TAS2R5Q9NYW4 299 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 MOKQ9UQ07 419 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 DTX4Q9Y2E6 619 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 NAP1L6A6NFF2 107 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF432O94892 652 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 AKR1C3P42330 323 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 ARRB1P49407 418 aaPredicted RBP12.9□□□□□ -0.34
PCDH8-201ENST00000338862 CAPZA1P52907 286 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 H2BFSP57053 126 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 STPG1Q5TH74 334 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 OVCH1Q7RTY7 1134 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 ADGRG3Q86Y34 549 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 OR10R2Q8NGX6 335 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 CMBLQ96DG6 245 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 SLC25A44Q96H78 314 aaPredicted RBP12.9□□□□□ -0.34
PCDH8-201ENST00000338862 MOGAT1Q96PD6 335 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 UBL7Q96S82 380 aaPredicted RBP12.9□□□□□ -0.34
PCDH8-201ENST00000338862 HEBP2Q9Y5Z4 205 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 SPEGQ15772 3267 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 UNC13CQ8NB66 2214 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 SLC22A23A1A5C7 686 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 FAM74A7A6NL05 159 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 ZNF736B4DX44 427 aaPredicted RBP12.9□□□□□ -0.34
PCDH8-201ENST00000338862 KRBOX1C9JBD0 128 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 D6RAR5 112 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 DCTN6O00399 190 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 PGAM2P15259 253 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 UBE2IP63279 158 aaKnown RBP12.9□□□□□ -0.34
PCDH8-201ENST00000338862 FAM74A3Q4VXF1 159 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 TMEM41AQ96HV5 264 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 POTEKPQ9BYX7 375 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 METTL8Q9H825 291 aaKnown RBP12.9□□□□□ -0.34
PCDH8-201ENST00000338862 PRR13Q9NZ81 148 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms