RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 FAM186AA6NE01 2351 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 SCDO00767 359 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 HCRTR2O43614 444 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 PTP4A3O75365 173 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 STK17BO94768 372 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 OR2C1O95371 312 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 AIFM1O95831 613 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 SERPINF1P36955 418 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 SMAD2Q15796 467 aaKnown RBP12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ALG10Q5BKT4 473 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 VITQ6UXI7 678 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ABHD13Q7L211 337 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 RASD2Q96D21 266 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 TOE1Q96GM8 510 aaKnown RBP12.2□□□□□ -0.46
COL2A1-201ENST00000337299 KLHL15Q96M94 604 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 NELFAQ9H3P2 528 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 KLHL42Q9P2K6 505 aa12.2□□□□□ -0.46
COL2A1-201ENST00000337299 ZNF850A8MQ14 1090 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 IFNA2P01563 188 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 HIST1H1TP22492 207 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-201ENST00000337299 TAGLN2P37802 199 aaKnown RBP12.19□□□□□ -0.46
COL2A1-201ENST00000337299 NPY4RP50391 375 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 HMGA2P52926 109 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 B2MP61769 119 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 SHC2P98077 582 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 MEF2DQ14814 521 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 LIPNQ5VXI9 398 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 LAS2Q8IYD9 372 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 OR4D6Q8NGJ1 314 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 AHCYL2Q96HN2 611 aaKnown RBP12.19□□□□□ -0.46
COL2A1-201ENST00000337299 PNO1Q9NRX1 252 aaKnown RBP12.19□□□□□ -0.46
COL2A1-201ENST00000337299 HCFC1R1Q9NWW0 138 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 RHBDD3Q9Y3P4 386 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 OR1A2Q9Y585 309 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 LINC00587B1AMM8 73 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 TMPRSS11DO60235 418 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 ZNF354AO60765 605 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-201ENST00000337299 IL12BP29460 328 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 NAXDQ8IW45 347 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 GABRG1Q8N1C3 465 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 THRSPQ92748 146 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 ZG16BQ96DA0 208 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 TSSK2Q96PF2 358 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 OR5B12Q96R08 314 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 MYADMQ96S97 322 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 TAF9BQ9HBM6 251 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 GHRLQ9UBU3 117 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 ABCA3Q99758 1704 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 ARRDC5A6NEK1 342 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 UMAD1C9J7I0 102 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 BCL2L11O43521 198 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 TGM5O43548 720 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 NDUFB6O95139 128 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 PMP2P02689 132 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 RHOP08100 348 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
COL2A1-201ENST00000337299 VIPR2P41587 438 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 AGERQ15109 404 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 FAM111BQ6SJ93 734 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 TMEM91Q6ZNR0 172 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 FAM71CQ8NEG0 241 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 SENP5Q96HI0 755 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-201ENST00000337299 SLC41A2Q96JW4 573 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 SLC25A21Q9BQT8 299 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-201ENST00000337299 ANKRD19PQ9H560 264 aa12.19□□□□□ -0.46
COL2A1-201ENST00000337299 IMPA2O14732 288 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 SCGB1D1O95968 90 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 RFC3P40938 356 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 SLC26A5P58743 744 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 RASGEF1BQ0VAM2 473 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 CDK5R1Q15078 307 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 TMEM201Q5SNT2 666 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 ZNF705AQ6ZN79 300 aaPredicted RBP12.18□□□□□ -0.46
COL2A1-201ENST00000337299 PUSL1Q8N0Z8 303 aaKnown RBP12.18□□□□□ -0.46
COL2A1-201ENST00000337299 CTSFQ9UBX1 484 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 WIF1Q9Y5W5 379 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 RFPL4AA6NLU0 287 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 RFPL4AL1F8VTS6 287 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 SFTA3P0C7M3 94 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 SERPINA2P20848 420 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 IGFALSP35858 605 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 DCST2Q5T1A1 773 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 OVCH1Q7RTY7 1134 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 WBP2Q969T9 261 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 EID2BQ96D98 161 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 OCSTAMPQ9BR26 566 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 GAR1Q9NY12 217 aaKnown RBP12.18□□□□□ -0.46
COL2A1-201ENST00000337299 OPN4Q9UHM6 478 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 hCG_1809904A0A1W2PP81 198 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 A0A1W2PR64 198 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 A0A1W2PRV1 198 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 MED19A0JLT2 244 aaPredicted RBP12.18□□□□□ -0.46
COL2A1-201ENST00000337299 GFYI3L273 518 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 SCAF4O95104 1147 aaKnown RBP12.18□□□□□ -0.46
COL2A1-201ENST00000337299 ARG1P05089 322 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 NR2C1P13056 603 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 PSMB6P28072 239 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 GNRHRP30968 328 aa12.18□□□□□ -0.46
COL2A1-201ENST00000337299 ATP1B3P54709 279 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms