RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 A0A0G2JLL6 359 aaPredicted RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 ZFP92A6NM28 416 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 AP4M1O00189 453 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 CTDSP2O14595 271 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 CST4P01036 141 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 GSK3AP49840 483 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 MAT1AQ00266 395 aaKnown RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 TOMM20LQ6UXN7 152 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 PRRT2Q7Z6L0 340 aaPredicted RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 SLAIN1Q8ND83 568 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 DMBX1Q8NFW5 382 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 OR14A16Q8NHC5 309 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 ANGPTL4Q9BY76 406 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 LRIT1Q9P2V4 623 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 NDRG4Q9ULP0 352 aaKnown RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 NSG1A0A0A6YYJ2 146 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 CRMP1Q14194 572 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF345Q14585 488 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 NFATC4Q14934 902 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 TREML2Q5T2D2 321 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 B3GNTL1Q67FW5 361 aaPredicted RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 TXNRD3NBQ6F5E7 133 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 PLXDC2Q6UX71 529 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 DOK3Q7L591 496 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 ABI3BPQ7Z7G0 1075 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 OR4F5Q8NH21 305 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 COPS9Q8WXC6 57 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 SAT2Q96F10 170 aaPredicted RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 TCTN2Q96GX1 697 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 CAPNS2Q96L46 248 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 UBXN10Q96LJ8 280 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 OR4F4Q96R69 305 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 DDOQ99489 341 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 TMEM184BQ9Y519 407 aaPredicted RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 SIX6O95475 246 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 HNRNPA2B1P22626 353 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 RPL12P30050 165 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 HOXC13P31276 330 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 SLC9A3R2Q15599 337 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 FAM74A3Q4VXF1 159 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 PLPP4Q5VZY2 271 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 DND1Q8IYX4 353 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 CLECL1Q8IZS7 167 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 FBXO27Q8NI29 283 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 NDRG1Q92597 394 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 TNRC6CQ9HCJ0 1690 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 A0A1B0GTW7 788 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 C8AP07357 584 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 OR1Q1Q15612 314 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 MED9Q9NWA0 146 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 OSGIN2Q9Y236 505 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 MRPL42Q9Y6G3 142 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 CSNK1G3Q9Y6M4 447 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 TRBV4-1A0A0J9YWV2 114 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 NKX2-1P43699 371 aaPredicted RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 SPCS3P61009 180 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 RPS26P62854 115 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 SHEQ5VZ18 495 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF765Q7L2R6 523 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 OR2AE1Q8NHA4 323 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ABHD4Q8TB40 342 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ST8SIA2Q92186 375 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 NKX2-4Q9H2Z4 354 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 TAS2R5Q9NYW4 299 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 GIMAP2Q9UG22 337 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 C7orf72A4D263 438 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF724A8MTY0 619 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF727A8MUV8 499 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 GSTP1P09211 210 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 NME1P15531 152 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 FUT1P19526 365 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 NME2P22392 152 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 OR10J1P30954 320 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 GGT5P36269 586 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 NOVA1P51513 510 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 OR7E24Q6IFN5 339 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 SLC16A14Q7RTX9 510 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF595Q8IYB9 648 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ADPRHL1Q8NDY3 354 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ACVR1CQ8NER5 493 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 OR52I1Q8NGK6 324 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 SCAMP5Q8TAC9 235 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 GPR119Q8TDV5 335 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 SGIP1Q9BQI5 828 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 PRSS16Q9NQE7 514 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 EMCNQ9ULC0 261 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 RABIFP47224 123 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 PRLHRP49683 370 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 PTTG1IPP53801 180 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 KIAA1024LP59773 190 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 LCN10Q6JVE6 187 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 RPUSD3Q6P087 351 aaKnown RBP5.11□□□□□ -1.59
PTPRB-202ENST00000334414 LETMD1Q6P1Q0 360 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF534Q76KX8 674 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 HSD17B11Q8NBQ5 300 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 KREMEN2Q8NCW0 462 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 FAM71CQ8NEG0 241 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 GHSRQ92847 366 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 SEH1LQ96EE3 360 aa5.11□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF768Q9H5H4 540 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms