RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KLK10O43240 276 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 DLX3O60479 287 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR2J3O76001 311 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 PMS2P2O95744 297 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 ALDOCP09972 364 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 ACKR3P25106 362 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 SNRPD2P62316 118 aaKnown RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 RTL8BQ17RB0 113 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 PDLIM3Q53GG5 364 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 DGAT2L6Q6ZPD8 337 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 NETO1Q8TDF5 533 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 PTP4A1Q93096 173 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 PRR11Q96HE9 360 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 SORT1Q99523 831 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 MENTQ9BUN1 341 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 METTL17Q9H7H0 456 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 POLMQ9NP87 494 aaPredicted RBP5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 TVP23BQ9NYZ1 205 aa5.65□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF670-ZNF695F2Z2N8 137 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ERI3O43414 337 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 MYOGP15173 224 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ARNTP27540 789 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 DUSP3P51452 185 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 LSRQ86X29 649 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZDHHC7Q9NXF8 308 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 B4GALT6Q9UBX8 382 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF521Q96K83 1311 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 TRBV11-1A0A0K0K1C0 115 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 AMY2BP19961 511 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 HOXA11P31270 313 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 CAMPP49913 170 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 SBK1Q52WX2 424 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR4D9Q8NGE8 314 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 RHOXF1Q8NHV9 184 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZDHHC15Q96MV8 337 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 EXOSC3Q9NQT5 275 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNF186Q9NXI6 227 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 KLK4Q9Y5K2 254 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 PRR14LQ5THK1 2151 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 UBE2L5PA0A1B0GUS4 154 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZC3H12DA2A288 527 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 NPEPPSL1A6NEC2 478 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 BMPR1BO00238 502 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 COX7A2P14406 83 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 TUBP50607 506 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 METAP1P53582 386 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 OAZ1P54368 228 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 FZD2Q14332 565 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 SIRPB2Q5JXA9 342 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR4F3Q6IEY1 312 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM71Q6P5X7 295 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 CENPVQ7Z7K6 275 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZDHHC22Q8N966 263 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 CMTM2Q8TAZ6 248 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 MYOZ3Q8TDC0 251 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 SPSB4Q96A44 273 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 HSPB9Q9BQS6 159 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 RANGRFQ9HD47 186 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 LGALS13Q9UHV8 139 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 PCDHGC4Q9Y5F7 938 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM205AQ6ZU69 1335 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 DPM2O94777 84 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 MPZL1O95297 269 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 CPSF4O95639 269 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 TESK1Q15569 626 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR2T5Q6IEZ7 315 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 FOXR1Q6PIV2 292 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 MDGA2Q7Z553 956 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ACOT4Q8N9L9 421 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR5AU1Q8NGC0 362 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR6M1Q8NGM8 313 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR2T29Q8NH02 315 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 NEUROG1Q92886 237 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 BORCS8Q96FH0 119 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 TBX5Q99593 518 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 PKMYT1Q99640 499 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 GPR20Q99678 358 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ERVK13-1Q9NX77 482 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ELOVL2Q9NXB9 296 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ABI3Q9P2A4 366 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ADGRB1O14514 1584 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 SMIM30A4D0T7 59 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 LACTBL1A8MY62 500 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 H3BVH4 76 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC16A6O15403 523 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ABCD3P28288 659 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 GPR3P46089 330 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 IRF9Q00978 393 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 EBPQ15125 230 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 DMRTC1Q5HYR2 192 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 IL27RAQ6UWB1 636 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZFPM1Q8IX07 1006 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 PLPP6Q8IY26 295 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 JKAMPQ9P055 326 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 DPM1O60762 260 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 CD3GP09693 182 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 GABRB1P18505 474 aa5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 CPSF6Q16630 551 aaKnown RBP eCLIP5.64□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM244Q5VVB8 128 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms