RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 RTN4RQ9BZR6 473 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 PRTFDC1Q9NRG1 225 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 ANXA2P2A6NMY6 339 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 EFCAB7A8K855 629 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 L7N2F9 121 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 ARPC5O15511 151 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 RLN1P04808 185 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 ANXA2P07355 339 aaKnown RBP11.18□□□□□ -0.62
VPS33B-201ENST00000333371 H2BFSP57053 126 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 RAB14P61106 215 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 ELFN2Q5R3F8 820 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 C1QL3Q5VWW1 255 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 SLC35D2Q76EJ3 337 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 FAM220AQ7Z4H9 259 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 BPHLQ86WA6 291 aaPredicted RBP11.18□□□□□ -0.62
VPS33B-201ENST00000333371 MCATQ8IVS2 390 aaKnown RBP11.18□□□□□ -0.62
VPS33B-201ENST00000333371 PRSS35Q8N3Z0 413 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 ZNF676Q8N7Q3 588 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 GALNT11Q8NCW6 608 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 FAM71CQ8NEG0 241 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 OR4C16Q8NGL9 310 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 CCDC74AQ96AQ1 378 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 TSPAN32Q96QS1 320 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 SYT4Q9H2B2 425 aa11.18□□□□□ -0.62
VPS33B-201ENST00000333371 OR5K3A6NET4 321 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 B4DGG1 531 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 SMAD9O15198 467 aaKnown RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 CREBL2O60519 120 aaPredicted RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 PPM1BO75688 479 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 CD1AP06126 327 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 IGHV4-34P06331 123 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 CD14P08571 375 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 ACSM4P0C7M7 580 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 THEGLP0DJG4 465 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 IFNGR1P15260 489 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 AP3S2P59780 193 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 HHEXQ03014 270 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 RPL18Q07020 188 aaKnown RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 OLFML2AQ68BL7 652 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 ZNF626Q68DY1 528 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 SLC16A9Q7RTY1 509 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 LRRC75AQ8NAA5 344 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 OR8S1Q8NH09 359 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 COQ8AQ8NI60 647 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 WBP1Q96G27 269 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 LINC00052Q96N35 136 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 LRFN5Q96NI6 719 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 ARPC5LQ9BPX5 153 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 MMP25Q9NPA2 562 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 TAS2R5Q9NYW4 299 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 AKAP7Q9P0M2 348 aaPredicted RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 LAMP5Q9UJQ1 280 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 GTF2A1LQ9UNN4 478 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 OR4C45A6NMZ5 311 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 C11orf98E9PRG8 122 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 ACOT7O00154 380 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 PRAMEF2O60811 474 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 PRAF2O60831 178 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 NDUFB6O95139 128 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 PLGP00747 810 aaPredicted RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 RNH1P13489 461 aaKnown RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 GLULP15104 373 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 PPM1FP49593 454 aaPredicted RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 PRPS1P60891 318 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 DCAF12L2Q5VW00 463 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 C3P1Q6ZMU1 363 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 ZSCAN1Q8NBB4 408 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 OR2G2Q8NGZ5 317 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 GPBAR1Q8TDU6 330 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 NSMAFQ92636 917 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 LCORQ96JN0 433 aaPredicted RBP11.17□□□□□ -0.62
VPS33B-201ENST00000333371 G6PC3Q9BUM1 346 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 CHST6Q9GZX3 395 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 KCNG2Q9UJ96 466 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 UNC13CQ8NB66 2214 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 CNTRLQ7Z7A1 2325 aa11.17□□□□□ -0.62
VPS33B-201ENST00000333371 OR2M5A3KFT3 312 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CDC14CA4D256 554 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CTNSO60931 367 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 GLSO94925 669 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 M6PRP20645 277 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 PRKACBP22694 351 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MAP2K6P52564 334 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MAZP56270 477 aaKnown RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 DMWDQ09019 674 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 IKZF1Q13422 519 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 ARMC6Q6NXE6 501 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 LRRN1Q6UXK5 716 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 ATG4DQ86TL0 474 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 OOSP2Q86WS3 158 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CDC20BQ86Y33 519 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 PM20D2Q8IYS1 436 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MARVELD3Q96A59 401 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MMABQ96EY8 250 aaPredicted RBP11.16□□□□□ -0.62
VPS33B-201ENST00000333371 CMTM3Q96MX0 182 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 DMRTA2Q96SC8 542 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 NRSN2Q9GZP1 204 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 SLITRK2Q9H156 845 aa11.16□□□□□ -0.62
VPS33B-201ENST00000333371 MYEF2Q9P2K5 600 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms