RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 MTNR1AP48039 350 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 LCN6P62502 163 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 RUNX1T1Q06455 604 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 ZNF239Q16600 458 aaKnown RBP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 NCCRP1Q6ZVX7 275 aaPredicted RBP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 USP43Q70EL4 1123 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 UBQLNLQ8IYU4 475 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 ZNF519Q8TB69 540 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 NXF2Q9GZY0 626 aaKnown RBP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 DCSTAMPQ9H295 470 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 OR51V1Q9H2C8 321 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 TXNIPQ9H3M7 391 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 MRPS18AQ9NVS2 196 aaKnown RBP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 LIPGQ9Y5X9 500 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 CACNA1AO00555 2505 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 A0A1W2PNV4 684 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 CCDC182A6NF36 153 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 EFCAB10A6NFE3 127 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 RPL27P61353 136 aaKnown RBP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 SLC35A1P78382 337 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 KRR1Q13601 381 aaKnown RBP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 MELKQ14680 651 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 ZNF181Q2M3W8 571 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 ZNF404Q494X3 552 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 EMC4Q5J8M3 183 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 ARMC4Q5T2S8 1044 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 LEG1Q6P5S2 330 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 PAQR6Q6TCH4 344 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 SLC22A16Q86VW1 577 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 FAM109AQ8N4B1 249 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 ARIH2OSQ8N7S6 290 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 ADPRHL1Q8NDY3 354 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 MCFD2Q8NI22 146 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 RNFT2Q96EX2 444 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 NMNAT2Q9BZQ4 307 aa20.8■□□□□ 0.92
TSEN54-201ENST00000333213 CCDC59Q9P031 241 aaKnown RBP20.8■□□□□ 0.92
TSEN54-201ENST00000333213 METTL15A6NJ78 407 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 AQP7P3A6NL99 342 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 EIF1AYO14602 144 aaKnown RBP20.79■□□□□ 0.92
TSEN54-201ENST00000333213 LCKP06239 509 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 LHX2P50458 406 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 LSM3P62310 102 aaKnown RBP20.79■□□□□ 0.92
TSEN54-201ENST00000333213 KLHL12Q53G59 568 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 GPR139Q6DWJ6 353 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 MEPCEQ7L2J0 689 aaKnown RBP20.79■□□□□ 0.92
TSEN54-201ENST00000333213 SHFQ7M4L6 423 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 PXKQ7Z7A4 578 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 CADM3Q8N126 398 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 OR52I1Q8NGK6 324 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 RFKQ969G6 155 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 TXNDC15Q96J42 360 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 TSSK2Q96PF2 358 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 UCN2Q96RP3 112 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 TEAD3Q99594 435 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 ZDHHC11Q9H8X9 412 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 ACKR4Q9NPB9 350 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 ASB6Q9NWX5 421 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 QPCTLQ9NXS2 382 aa20.79■□□□□ 0.92
TSEN54-201ENST00000333213 IGHV3-15A0A0B4J1V0 119 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 GJE1A6NN92 205 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 C1QTNF9BB2RNN3 333 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 DCTN6O00399 190 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 AIREO43918 545 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 WISP2O76076 250 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 C1QTNF9P0C862 333 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 IFNGR1P15260 489 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 POU3F2P20265 443 aaPredicted RBP20.78■□□□□ 0.92
TSEN54-201ENST00000333213 POU3F1Q03052 451 aaPredicted RBP20.78■□□□□ 0.92
TSEN54-201ENST00000333213 ESPNLQ6ZVH7 1005 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 STX19Q8N4C7 294 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 EXD3Q8N9H8 876 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 OR51L1Q8NGJ5 315 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 CRELD1Q96HD1 420 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 NDEL1Q9GZM8 345 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 DEFB127Q9H1M4 99 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 MED29Q9NX70 200 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 H2AFY2Q9P0M6 372 aaPredicted RBP20.78■□□□□ 0.92
TSEN54-201ENST00000333213 ZNF407Q9C0G0 2248 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 ARHGEF9O43307 516 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 UPK1BO75841 260 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 ENPP1P22413 925 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 ACVR1BP36896 505 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 HSF1Q00613 529 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 SLC10A1Q14973 349 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 GID4Q8IVV7 300 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 ZADH2Q8N4Q0 377 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 KBTBD8Q8NFY9 601 aa20.78■□□□□ 0.92
TSEN54-201ENST00000333213 C9orf43Q8TAL5 461 aaPredicted RBP20.78■□□□□ 0.92
TSEN54-201ENST00000333213 PAICSP22234 425 aaKnown RBP20.77■□□□□ 0.92
TSEN54-201ENST00000333213 CLDN18P56856 261 aa20.77■□□□□ 0.92
TSEN54-201ENST00000333213 RAC3P60763 192 aa20.77■□□□□ 0.92
TSEN54-201ENST00000333213 IRF3Q14653 427 aa20.77■□□□□ 0.92
TSEN54-201ENST00000333213 OR4F15Q8NGB8 312 aa20.77■□□□□ 0.92
TSEN54-201ENST00000333213 RPRD1BQ9NQG5 326 aaKnown RBP20.77■□□□□ 0.92
TSEN54-201ENST00000333213 TNFRSF10DQ9UBN6 386 aa20.77■□□□□ 0.92
TSEN54-201ENST00000333213 CACNA1GO43497 2377 aa20.77■□□□□ 0.92
TSEN54-201ENST00000333213 PTPRQQ9UMZ3 2332 aa20.77■□□□□ 0.92
TSEN54-201ENST00000333213 A0A1W2PRG6 482 aa20.76■□□□□ 0.91
TSEN54-201ENST00000333213 SNTNA6NMZ2 147 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms