RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CIB4A0PJX0 185 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 WDPCPO95876 746 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 SLC2A2P11168 524 aaPredicted RBP14.38□□□□□ -0.11
PDGFB-201ENST00000331163 SDC2P34741 201 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 PTGS2P35354 604 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 AGFG1P52594 562 aaKnown RBP14.38□□□□□ -0.11
PDGFB-201ENST00000331163 CSNK2BP67870 215 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 FOXK2Q01167 660 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 CRTC2Q53ET0 693 aaPredicted RBP14.38□□□□□ -0.11
PDGFB-201ENST00000331163 BMPERQ8N8U9 685 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 SPERTQ8NA61 448 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 BEX1Q9HBH7 125 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 ING3Q9NXR8 418 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 TMEM5Q9Y2B1 443 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 PCDHGB2Q9Y5G2 931 aa14.38□□□□□ -0.11
PDGFB-201ENST00000331163 FCER2P06734 321 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 EIF2S3P41091 472 aaKnown RBP14.37□□□□□ -0.11
PDGFB-201ENST00000331163 POU4F3Q15319 338 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 CEBPEQ15744 281 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 C1orf140Q5VVS0 124 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 FAHD1Q6P587 224 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 MAMDC2Q7Z304 686 aaPredicted RBP14.37□□□□□ -0.11
PDGFB-201ENST00000331163 GPR155Q7Z3F1 870 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 TMEM99Q8N816 258 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 OR4C15Q8NGM1 316 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 ADAD1Q96M93 576 aaKnown RBP14.37□□□□□ -0.11
PDGFB-201ENST00000331163 TM9SF2Q99805 663 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 RACGAP1Q9H0H5 632 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 ACAD8Q9UKU7 415 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 AKAP13Q12802 2813 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 A0A0B4J2E0 115 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 A0A1B0GX12 115 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 A0A1W2PRG6 482 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 NCR1O76036 304 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 CSF3P09919 207 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 COX10Q12887 443 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 PCOLCEQ15113 449 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.37□□□□□ -0.11
PDGFB-201ENST00000331163 DCAF10Q5QP82 559 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 SLC37A3Q8NCC5 494 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 OR10H5Q8NGA6 315 aa14.37□□□□□ -0.11
PDGFB-201ENST00000331163 UBL7Q96S82 380 aaPredicted RBP14.37□□□□□ -0.11
PDGFB-201ENST00000331163 CCDC86Q9H6F5 360 aaKnown RBP14.37□□□□□ -0.11
PDGFB-201ENST00000331163 A0A0B4J293 547 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 CASKO14936 926 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF620Q6ZNG0 422 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF367Q7RTV3 350 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 BPHLQ86WA6 291 aaPredicted RBP14.36□□□□□ -0.11
PDGFB-201ENST00000331163 PM20D2Q8IYS1 436 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 RFKQ969G6 155 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 RBM24Q9BX46 236 aaKnown RBP14.36□□□□□ -0.11
PDGFB-201ENST00000331163 HCAR1Q9BXC0 346 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 V9GYH0 126 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 COX6A1P12074 109 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ICAM2P13598 275 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF43P17038 809 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 TBXA2RP21731 343 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 RPL18Q07020 188 aaKnown RBP14.36□□□□□ -0.11
PDGFB-201ENST00000331163 C19orf57Q0VDD7 668 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 SSPNQ14714 243 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 MEP1BQ16820 701 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 LCN1P1Q5VSP4 162 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF613Q6PF04 617 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 PPP1R32Q7Z5V6 425 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ROBO4Q8WZ75 1007 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF764Q96H86 408 aaPredicted RBP14.36□□□□□ -0.11
PDGFB-201ENST00000331163 SRRQ9GZT4 340 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 CHRNA9Q9UGM1 479 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 SLC23A1Q9UHI7 598 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 PCNX3Q9H6A9 2034 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 TRAV6A0A075B6T7 132 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 IGHV1-45A0A0A0MS14 117 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 A0A0G2JMM0 328 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 LOC105371267A0A1B0GV96 52 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 A0A1W2PNU3 283 aaPredicted RBP14.36□□□□□ -0.11
PDGFB-201ENST00000331163 A0A1W2PPB8 328 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 A0A1W2PRS3 328 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 KIR3DP1A8MWS1 328 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 TRIM3O75382 744 aaPredicted RBP14.36□□□□□ -0.11
PDGFB-201ENST00000331163 RENP00797 406 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 LIFP15018 202 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 PRKXP51817 358 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ILKQ13418 452 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 RSPO4Q2I0M5 234 aaPredicted RBP14.36□□□□□ -0.11
PDGFB-201ENST00000331163 KLHL26Q53HC5 615 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 RPTNQ6XPR3 784 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 LINC00346Q8IVM7 164 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ZNF440Q8IYI8 595 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 Q8N402 240 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 GALNT16Q8N428 558 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 CRELD1Q96HD1 420 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 OPALINQ96PE5 141 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 GABARAPL1Q9H0R8 117 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ZC4H2Q9NQZ6 224 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ACOXLQ9NUZ1 547 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 MED17Q9NVC6 651 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 ASB6Q9NWX5 421 aa14.36□□□□□ -0.11
PDGFB-201ENST00000331163 RABL2AQ9UBK7 228 aaPredicted RBP14.36□□□□□ -0.11
PDGFB-201ENST00000331163 PNMTP11086 282 aa14.35□□□□□ -0.11
PDGFB-201ENST00000331163 IFNGR1P15260 489 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms