RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 LMAN2LQ9H0V9 348 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 EML5Q05BV3 1969 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 A0A0D9SG52 128 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 AK1P00568 194 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 AGTR1P30556 359 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 CSF2RBP32927 897 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 PRSS3P35030 304 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 CBX5P45973 191 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 HTRA4P83105 476 aaPredicted RBP13.15□□□□□ -0.3
SNX20-202ENST00000330943 FAM53BQ14153 422 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 ULK3Q6PHR2 472 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 PRSS41Q7RTY9 318 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 RSPRY1Q96DX4 576 aa13.15□□□□□ -0.3
SNX20-202ENST00000330943 WDFY4Q6ZS81 3184 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 TMEM82A0PJX8 343 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 GPR89AB7ZAQ6 455 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 GP1BAP07359 652 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 GPR89BP0CG08 455 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 POU3F4P49335 361 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 AKR1C2P52895 323 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 AKR1C1Q04828 323 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
SNX20-202ENST00000330943 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 BIVMQ86UB2 503 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 BADQ92934 168 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 C12orf57Q99622 126 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 RSPH9Q9H1X1 276 aaPredicted RBP13.14□□□□□ -0.31
SNX20-202ENST00000330943 DENND4AQ7Z401 1863 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 A0A087WV62 115 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 TRBV5-5A0A0J9YX44 114 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 OR5H14A6NHG9 310 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 ATG12O94817 140 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 RASGRP1O95267 797 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 GNRH1P01148 92 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 CDKN2AP42771 156 aaKnown RBP13.14□□□□□ -0.31
SNX20-202ENST00000330943 UBE2IP63279 158 aaKnown RBP13.14□□□□□ -0.31
SNX20-202ENST00000330943 PRICKLE4Q2TBC4 344 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 JMJD6Q6NYC1 403 aaPredicted RBP13.14□□□□□ -0.31
SNX20-202ENST00000330943 FBXO42Q6P3S6 717 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 OR4N2Q8NGD1 307 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 LILRB1Q8NHL6 650 aaPredicted RBP13.14□□□□□ -0.31
SNX20-202ENST00000330943 NT5CQ8TCD5 201 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 CCDC107Q8WV48 283 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 VRK1Q99986 396 aaPredicted RBP13.14□□□□□ -0.31
SNX20-202ENST00000330943 GAL3ST1Q99999 423 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 NDRG3Q9UGV2 375 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 FBXO4Q9UKT5 387 aa13.14□□□□□ -0.31
SNX20-202ENST00000330943 MRPS2Q9Y399 296 aaKnown RBP13.14□□□□□ -0.31
SNX20-202ENST00000330943 PMS2P2O95744 297 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 CEACAM5P06731 702 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 CSRP1P21291 193 aaKnown RBP13.13□□□□□ -0.31
SNX20-202ENST00000330943 RPS27P42677 84 aaKnown RBP13.13□□□□□ -0.31
SNX20-202ENST00000330943 WASP42768 502 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 PSMD4P55036 377 aaKnown RBP13.13□□□□□ -0.31
SNX20-202ENST00000330943 LINC00114Q6XXX2 140 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 KCNRGQ8N5I3 272 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 CLEC1AQ8NC01 280 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 OR5T3Q8NGG3 340 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 USB1Q9BQ65 265 aaKnown RBP13.13□□□□□ -0.31
SNX20-202ENST00000330943 PDCD10Q9BUL8 212 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 SERGEFQ9UGK8 458 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 OR10H1Q9Y4A9 318 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 CACNA1CQ13936 2221 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 BLOC1S5-TXNDC5H3BN57 136 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 M0QYG6 137 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 CCSO14618 274 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 ARPC3O15145 178 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 CTSVO60911 334 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 ITGB2P05107 769 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 TAF13Q15543 124 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 AGBL4Q5VU57 503 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 GLT8D1Q68CQ7 371 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 HAGHLQ6PII5 290 aaPredicted RBP13.13□□□□□ -0.31
SNX20-202ENST00000330943 SLC16A9Q7RTY1 509 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 JAZF1Q86VZ6 243 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 CCDC36Q8IYA8 594 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 GABRG1Q8N1C3 465 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 OR1J2Q8NGS2 313 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 ZNF417Q8TAU3 575 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 ASB13Q8WXK3 278 aa13.13□□□□□ -0.31
SNX20-202ENST00000330943 ADAT1Q9BUB4 502 aaKnown RBP13.13□□□□□ -0.31
SNX20-202ENST00000330943 ZNF768Q9H5H4 540 aaKnown RBP13.13□□□□□ -0.31
SNX20-202ENST00000330943 GPN3Q9UHW5 284 aaPredicted RBP13.13□□□□□ -0.31
SNX20-202ENST00000330943 TRBV23OR9-2A0A075B6M9 112 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 BCL2L11O43521 198 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 KCNJ13O60928 360 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 TIMP1P01033 207 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 MAP3K8P41279 467 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 HOXA1P49639 335 aaPredicted RBP13.12□□□□□ -0.31
SNX20-202ENST00000330943 GPR143P51810 404 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 PPIAP62937 165 aaKnown RBP13.12□□□□□ -0.31
SNX20-202ENST00000330943 HFEQ30201 348 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 ZCCHC12Q6PEW1 402 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 PUSL1Q8N0Z8 303 aaKnown RBP13.12□□□□□ -0.31
SNX20-202ENST00000330943 OR52R1Q8NGF1 315 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 COMMD4Q9H0A8 199 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 C1orf198Q9H425 327 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 IFT22Q9H7X7 185 aa13.12□□□□□ -0.31
SNX20-202ENST00000330943 SRA1Q9HD15 236 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms