RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CDH26Q8IXH8 852 aa12.91□□□□□ -0.34
EPHB3-201ENST00000330394 FAM71E2Q8N5Q1 922 aa12.91□□□□□ -0.34
EPHB3-201ENST00000330394 IL17RCQ8NAC3 791 aa12.91□□□□□ -0.34
EPHB3-201ENST00000330394 VN1R2Q8NFZ6 395 aa12.91□□□□□ -0.34
EPHB3-201ENST00000330394 LMX1AQ8TE12 382 aa12.91□□□□□ -0.34
EPHB3-201ENST00000330394 BCL7CQ8WUZ0 217 aaPredicted RBP12.91□□□□□ -0.34
EPHB3-201ENST00000330394 APOOQ9BUR5 198 aa12.91□□□□□ -0.34
EPHB3-201ENST00000330394 KIF25Q9UIL4 384 aa12.91□□□□□ -0.34
EPHB3-201ENST00000330394 FBXO4Q9UKT5 387 aa12.91□□□□□ -0.34
EPHB3-201ENST00000330394 TMEM212A6NML5 194 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 DPM1O60762 260 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 WDPCPO95876 746 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 P2RY2P41231 377 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 HSD11B2P80365 405 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 HLXQ14774 488 aaPredicted RBP12.9□□□□□ -0.34
EPHB3-201ENST00000330394 FXNQ16595 210 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 MAMSTRQ6ZN01 415 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 SUMF2Q8NBJ7 301 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 SCGB1C1Q8TD33 95 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 MYADMQ96S97 322 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 SLC25A21Q9BQT8 299 aaPredicted RBP12.9□□□□□ -0.34
EPHB3-201ENST00000330394 RAD51DO75771 328 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 KLF8O95600 359 aaPredicted RBP12.9□□□□□ -0.34
EPHB3-201ENST00000330394 IFNA2P01563 188 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 CEBPBP17676 345 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 ZP3P21754 424 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 ZNF41P51814 821 aaPredicted RBP12.9□□□□□ -0.34
EPHB3-201ENST00000330394 TAS2R31P59538 309 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 TCEAL6Q6IPX3 200 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 TMEM184AQ6ZMB5 413 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 OR4D6Q8NGJ1 314 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 C10orf90Q96M02 699 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 IL20Q9NYY1 176 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 IDSB3KWA1 339 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 CD14P08571 375 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 GABRR1P24046 479 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 P2RX1P51575 399 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 SNRPNP63162 240 aaKnown RBP12.9□□□□□ -0.34
EPHB3-201ENST00000330394 GPM6BQ13491 265 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 DMRTC1Q5HYR2 192 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 TMEM71Q6P5X7 295 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 TMEM151BQ8IW70 566 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 HAVCR2Q8TDQ0 301 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 PPP1R1CQ8WVI7 109 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 TCEAL7Q9BRU2 100 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 BCL2L10Q9HD36 194 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 C20orf141Q9NUB4 165 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 PURGQ9UJV8 347 aaKnown RBP12.9□□□□□ -0.34
EPHB3-201ENST00000330394 PIKFYVEQ9Y2I7 2098 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
EPHB3-201ENST00000330394 CD160O95971 181 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 PCBP3P57721 371 aaKnown RBP12.89□□□□□ -0.35
EPHB3-201ENST00000330394 HHEXQ03014 270 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 HNF4GQ14541 408 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 TMEM244Q5VVB8 128 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 GPR139Q6DWJ6 353 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 HOXB13Q92826 284 aaPredicted RBP12.89□□□□□ -0.35
EPHB3-201ENST00000330394 YIPF5Q969M3 257 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 SPACA5Q96QH8 159 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 PITHD1Q9GZP4 211 aaPredicted RBP12.89□□□□□ -0.35
EPHB3-201ENST00000330394 PLEKHJ1Q9NW61 149 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 LRFN1Q9P244 771 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 CSAG2Q9Y5P2 127 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 RNF215Q9Y6U7 377 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 JMJD7P0C870 316 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 S100PP25815 95 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 TACR3P29371 465 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 METAP1P53582 386 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 NDUFA6P56556 154 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 C19orf57Q0VDD7 668 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 BATFQ16520 125 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 CST9Q5W186 159 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 SULF2Q8IWU5 870 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 GABRG1Q8N1C3 465 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 OR52H1Q8NGJ2 320 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 GOT1L1Q8NHS2 421 aaPredicted RBP12.89□□□□□ -0.35
EPHB3-201ENST00000330394 FAM213BQ8TBF2 198 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 SLC22A8Q8TCC7 542 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 CNTNAP3Q9BZ76 1288 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 OR52A5Q9H2C5 316 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 CCDC86Q9H6F5 360 aaKnown RBP12.89□□□□□ -0.35
EPHB3-201ENST00000330394 SMCO4Q9NRQ5 59 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 P2RY10O00398 339 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 KCNJ13O60928 360 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 GLAP06280 429 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 SPI1P17947 270 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 SFTPDP35247 375 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 PLA2G7Q13093 441 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 RUNX3Q13761 415 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
EPHB3-201ENST00000330394 MELKQ14680 651 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 PRAMEF8Q5VWM4 474 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 PRAMEF7Q5VXH5 474 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 ADGRG3Q86Y34 549 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 OR5D14Q8NGL3 314 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 GAREM1Q9H706 876 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 TPPPO94811 219 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 OR4E1P0C645 316 aa12.89□□□□□ -0.35
EPHB3-201ENST00000330394 SERPINA2P20848 420 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms