RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 POMGNT2Q8NAT1 580 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 SLC30A2Q9BRI3 323 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 PAIP1Q9H074 479 aaKnown RBP12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 ZNF385DQ9H6B1 395 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 EXOSC3Q9NQT5 275 aaKnown RBP12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 FGFR1OP2Q9NVK5 253 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 PURGQ9UJV8 347 aaKnown RBP12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 IFT52Q9Y366 437 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 WIPI2Q9Y4P8 454 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 SOX21Q9Y651 276 aaPredicted RBP12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 BCHEP06276 602 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 CHRM4P08173 479 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 RYKP34925 604 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 PGM1P36871 562 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 RAD52P43351 418 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 HTR3AP46098 478 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 PROK1P58294 105 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 GUCY1A3Q02108 690 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 FUT5Q11128 374 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 MERTKQ12866 999 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 ZNF154Q13106 437 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 MAD2L1BPQ15013 274 aaPredicted RBP12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 MAPRE2Q15555 327 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 MAPK14Q16539 360 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 LIN52Q52LA3 116 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 LRIF1Q5T3J3 769 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 PRAMEF8Q5VWM4 474 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 PRAMEF7Q5VXH5 474 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 C9orf139Q6ZV77 190 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 OLIG3Q7RTU3 272 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 ABHD12BQ7Z5M8 362 aaPredicted RBP12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 JAZF1Q86VZ6 243 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 KRT73Q86Y46 540 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 SLC25A43Q8WUT9 341 aaPredicted RBP12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 BCL2L2Q92843 193 aaPredicted RBP12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 KTI12Q96EK9 354 aaPredicted RBP12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 AURKBQ96GD4 344 aaPredicted RBP12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 ZNF317Q96PQ6 595 aaPredicted RBP12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 SYT3Q9BQG1 590 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 TMEM120AQ9BXJ8 343 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 SLC38A1Q9H2H9 487 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 NOX3Q9HBY0 568 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 SLC6A13Q9NSD5 602 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 ACER3Q9NUN7 267 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 KCNE5Q9UJ90 142 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 TENM2Q9NT68 2774 aa12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 TET2Q6N021 2002 aaPredicted RBP12.54□□□□□ -0.4
CTHRC1-201ENST00000330295 MDFIC2A0A1B0GVS7 189 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 DNPH1O43598 174 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 PIP5K1CO60331 668 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 PMS2P2O95744 297 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 LGI1O95970 557 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 TFPTP0C1Z6 253 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 TFPIP10646 304 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 MDH1P40925 334 aaKnown RBP12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 APOBEC1P41238 236 aaKnown RBP12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 SESN3P58005 492 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 COPZ1P61923 177 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 GTDC1Q4AE62 458 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 GCNT6Q5T4J0 391 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 OR52P1PQ8NH57 321 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 LINC01006Q8NI28 216 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 BBS10Q8TAM1 723 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 MAGEE2Q8TD90 523 aaPredicted RBP12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 SLC38A5Q8WUX1 472 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 SGCDQ92629 289 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 DNAJA3Q96EY1 480 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 SPATA5L1Q9BVQ7 753 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 CCDC134Q9H6E4 229 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 A4GALTQ9NPC4 353 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 TNFRSF19Q9NS68 423 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 SEC14L4Q9UDX3 406 aa12.53□□□□□ -0.4
CTHRC1-201ENST00000330295 DNAH9Q9NYC9 4486 aa12.52□□□□□ -0.4
CTHRC1-201ENST00000330295 A0A096LPE4 126 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 A0A1W2PPZ6 126 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 PRAMEF27A3QJZ7 478 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 CFAP73A6NFT4 308 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 SRRM5B3KS81 715 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 DNAJA2O60884 412 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 FOXH1O75593 365 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 NAT2P11245 290 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 CBR1P16152 277 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 NR4A1P22736 598 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 MAP2K6P52564 334 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 MVDP53602 400 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 NFYCQ13952 458 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 MMEL1Q495T6 779 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF771Q7L3S4 317 aaPredicted RBP12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 GRINAQ7Z429 371 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 FAM71CQ8NEG0 241 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 ZG16BQ96DA0 208 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 TMEM19Q96HH6 336 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 ZNF607Q96SK3 696 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 SH3GL1Q99961 368 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 GAL3ST1Q99999 423 aa12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 MYEF2Q9P2K5 600 aaKnown RBP12.52□□□□□ -0.41
CTHRC1-201ENST00000330295 IGHV3OR16-10A0A075B7F0 116 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 CENPVL1A0A0U1RR11 272 aa12.51□□□□□ -0.41
CTHRC1-201ENST00000330295 CLDN25C9JDP6 229 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms