RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 WDFY1Q8IWB7 410 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 C10orf53Q8N6V4 93 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 SLC26A7Q8TE54 656 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 LRRC58Q96CX6 371 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 SLC25A44Q96H78 314 aaPredicted RBP11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 VRK1Q99986 396 aaPredicted RBP11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 PRSS27Q9BQR3 290 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 TMEM120AQ9BXJ8 343 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 GLTPQ9NZD2 209 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 BAG5Q9UL15 447 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 CMAHPQ9Y471 501 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 STAB1Q9NY15 2570 aa11.73□□□□□ -0.53
GTF3C6-201ENST00000329970 C11orf98E9PRG8 122 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 MGRN1O60291 552 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 SEC14L2O76054 403 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 STAMBPO95630 424 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 CH25HO95992 272 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 TROVE2P10155 538 aaKnown RBP eCLIP11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 B4GALT1P15291 398 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF23P17027 643 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 GLRXP35754 106 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 CAPZA2P47755 286 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 BIDP55957 195 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 RPS23P62266 143 aaKnown RBP11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 MAPRE2Q15555 327 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 FXNQ16595 210 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 HIST3H3Q16695 136 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 SPATA21Q7Z572 469 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 DPPA2Q7Z7J5 298 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF786Q8N393 782 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 ANKS4BQ8N8V4 417 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 VANGL1Q8TAA9 524 aaPredicted RBP11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 LIPHQ8WWY8 451 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF566Q969W8 418 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 MRPL24Q96A35 216 aaKnown RBP11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 FOXN4Q96NZ1 517 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 KCNK17Q96T54 332 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 SEPHS2Q99611 448 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 MEPEQ9NQ76 525 aaPredicted RBP11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 SPEF1Q9Y4P9 236 aa11.72□□□□□ -0.53
GTF3C6-201ENST00000329970 HTR3EA5X5Y0 456 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 LMX1BO60663 402 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 SASH3O75995 380 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 OR5F1O95221 314 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 RAB36O95755 333 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 IFNA14P01570 189 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 MT-ND1P03886 318 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 HIST1H2ABP04908 130 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 IGFBP1P08833 259 aaPredicted RBP11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 TACSTD2P09758 323 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 TSPAN19P0C672 248 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 PGA4P0DJD7 388 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 PGA3P0DJD8 388 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 THRBP10828 461 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 CD79AP11912 226 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF16P17020 682 aaPredicted RBP11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF133P52736 654 aaPredicted RBP11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 RAB1AP62820 205 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 GGTLC2Q14390 218 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 KRT80Q6KB66 452 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 HIST3H2AQ7L7L0 130 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 HDDC2Q7Z4H3 204 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 CARM1Q86X55 608 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 SVOPLQ8N434 492 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 HPS1Q92902 700 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 HIST1H2ACQ93077 130 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 ZNF583Q96ND8 569 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 ECSITQ9BQ95 431 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 BPESC1Q9GZL8 116 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 SLC7A8Q9UHI5 535 aa11.71□□□□□ -0.53
GTF3C6-201ENST00000329970 IGHV4-61A0A0C4DH41 118 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 NPIPB13A6NJU9 1138 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 NPIPB4C9JG80 1138 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 SLC22A2O15244 555 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 DHHO43323 396 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 RNF13O43567 381 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 SYNGR3O43761 229 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 BCL10O95999 233 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 IGHG1P01857 330 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 SERPINA5P05154 406 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 OR8G3PP0DMU2 310 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 APEHP13798 732 aaKnown RBP11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 DAOP14920 347 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 GIPRP48546 466 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 PTDSS1P48651 473 aaKnown RBP11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 ARFIP2P53365 341 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 KLF10Q13118 480 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 RABL3Q5HYI8 236 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 REP15Q6BDI9 236 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 LRFN4Q6PJG9 635 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 UGT2A3Q6UWM9 527 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 NANOGNBQ7Z5D8 188 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 CDK20Q8IZL9 346 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 SLC22A24Q8N4F4 322 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 LRRC17Q8N6Y2 441 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 MS4A3Q96HJ5 214 aa11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 MRPL13Q9BYD1 178 aaKnown RBP11.7□□□□□ -0.54
GTF3C6-201ENST00000329970 MS4A5Q9H3V2 200 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms