RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 IQCJQ1A5X6 159 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 RAET1LQ5VY80 246 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 NPWQ8N729 165 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 OR1S2Q8NGQ3 325 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 DYNC2LI1Q8TCX1 351 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 RPL3LQ92901 407 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 ZNF251Q9BRH9 671 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ALG1L2C9J202 215 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 DPP4P27487 766 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 TPMTP51580 245 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 MGAT3Q09327 533 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 NKPD1Q17RQ9 610 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ZNF620Q6ZNG0 422 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 Q6ZNX1 250 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ZNF611Q8N823 705 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ST6GALNAC5Q9BVH7 336 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 EXOSC3Q9NQT5 275 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 GAR1Q9NY12 217 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 FKBP11Q9NYL4 201 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 NDRG3Q9UGV2 375 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 SIAH2O43255 324 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 FUCA1P04066 466 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 RHOP08100 348 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 SFTPDP35247 375 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ZNF684Q5T5D7 378 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ACOT7LQ6ZUV0 252 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 PHOSPHO2Q8TCD6 241 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 RPUSD4Q96CM3 377 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 EGLN1Q9GZT9 426 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 CHST6Q9GZX3 395 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 LYRM4Q9HD34 91 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 PGAP2Q9UHJ9 254 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 TRIM77I1YAP6 450 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 DNPH1O43598 174 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 WNT11O96014 354 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 SNRNP70P08621 437 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 ASCL1P50553 236 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 GPLD1P80108 840 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 MPPED2Q15777 294 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 C2orf27AQ580R0 203 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 BTNL8Q6UX41 500 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 LYSMD2Q8IV50 215 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 NAGSQ8N159 534 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 OBP2AQ9NY56 170 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 EHFQ9NZC4 300 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 CNIH4Q9P003 139 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 DIMT1Q9UNQ2 313 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 A0A0J9YY10 115 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 PRLHRP49683 370 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 CLDN6P56747 220 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 EXT1Q16394 746 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 PGGHGQ32M88 737 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 NRARPQ7Z6K4 114 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 GJC3Q8NFK1 279 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 APIPQ96GX9 242 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 UBXN10Q96LJ8 280 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 WDR76Q9H967 626 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 MED9Q9NWA0 146 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 MPIG6BO95866 241 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 BPIFB3P59826 476 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 EXOSC2Q13868 293 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 LRRC26Q2I0M4 334 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 FCRL6Q6DN72 434 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 TANGO2Q6ICL3 276 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 Q6ZRG5 221 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ADGRE4PQ86SQ3 457 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 CDH26Q8IXH8 852 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 MMP21Q8N119 569 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 TMIGD2Q96BF3 282 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 RAB3CQ96E17 227 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 TCTN2Q96GX1 697 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ATF6BQ99941 703 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 TRAF4Q9BUZ4 470 aaPredicted RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 GIMAP2Q9UG22 337 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 SLC31A2O15432 143 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 B4GAT1O43505 415 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 PDGFAP04085 211 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 HPNP05981 417 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 HTR2CP28335 458 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 CCR9P51686 369 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 MUCL1Q96DR8 90 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 CDCA4Q9BXL8 241 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 NDUFB11Q9NX14 153 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ZNF443Q9Y2A4 671 aaPredicted RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 OR5H15A6NDH6 313 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 OR5H14A6NHG9 310 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 OR5H1A6NKK0 313 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 SDC1P18827 310 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 CSNK1A1P48729 337 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ZNF140P52738 457 aaPredicted RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 CXADRP78310 365 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 MRPS21P82921 87 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 PDE7AQ13946 482 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 EMG1Q92979 244 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 ZNF275Q9NSD4 429 aaPredicted RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 A6NIN4 97 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 ADARB1P78563 741 aaKnown RBP5.88□□□□□ -1.47
SSH1-202ENST00000326495 PNLIPRP3Q17RR3 467 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 AFMIDQ63HM1 303 aa5.88□□□□□ -1.47
SSH1-202ENST00000326495 TMPRSS7Q7RTY8 843 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms