RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 HERVK_113Q902F9 699 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 WNT2BQ93097 391 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 SEC22AQ96IW7 307 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 ULBP3Q9BZM4 244 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 RNF208Q9H0X6 261 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 MRM2Q9UI43 246 aaKnown RBP16.29■□□□□ 0.2
PRKCB-202ENST00000321728 FBXO4Q9UKT5 387 aa16.29■□□□□ 0.2
PRKCB-202ENST00000321728 TMEM218A2RU14 115 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 B3GALT2O43825 422 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 SLC25A12O75746 678 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 BDKRB2P30411 391 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 CD96P40200 585 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 ACAA2P42765 397 aaKnown RBP16.28■□□□□ 0.2
PRKCB-202ENST00000321728 POU3F4P49335 361 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 GPR85P60893 370 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 MANEAQ5SRI9 462 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF684Q5T5D7 378 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 LIN54Q6MZP7 749 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 OR51A4Q8NGJ6 313 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 STACQ99469 402 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 GAL3ST1Q99999 423 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 LMAN2LQ9H0V9 348 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 DAPP1Q9UN19 280 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 OR5K4A6NMS3 321 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 UPK3AO75631 287 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 ITGB2P05107 769 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 DLSTP36957 453 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF234Q14588 700 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 KIRREL2Q6UWL6 708 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 GABRG1Q8N1C3 465 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 CLEC1AQ8NC01 280 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 OR1J2Q8NGS2 313 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 SMARCD2Q92925 531 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 MNTQ99583 582 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 ALX4Q9H161 411 aaPredicted RBP16.28■□□□□ 0.2
PRKCB-202ENST00000321728 TNFSF18Q9UNG2 199 aa16.28■□□□□ 0.2
PRKCB-202ENST00000321728 PRSS44E7EML9 344 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 M0QYG6 137 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 CCSO14618 274 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 OR2F2O95006 317 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 RAB3DO95716 219 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 OR2F1Q13607 317 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 ULK3Q6PHR2 472 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 UQCC3Q6UW78 93 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 SLC39A5Q6ZMH5 540 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 ZNF417Q8TAU3 575 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 NKX3-1Q99801 234 aaPredicted RBP16.27■□□□□ 0.2
PRKCB-202ENST00000321728 NMNAT2Q9BZQ4 307 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 ATG5Q9H1Y0 275 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 FANCFQ9NPI8 374 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 BIN3Q9NQY0 253 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 DNAJB12Q9NXW2 375 aaKnown RBP16.27■□□□□ 0.2
PRKCB-202ENST00000321728 COA4Q9NYJ1 87 aa16.27■□□□□ 0.2
PRKCB-202ENST00000321728 NOP16Q9Y3C1 178 aaKnown RBP16.27■□□□□ 0.2
PRKCB-202ENST00000321728 TRBV5-5A0A0J9YX44 114 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 C1QTNF3-AMACRE9PGA6 284 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 F5H0A9 414 aaPredicted RBP16.27■□□□□ 0.19
PRKCB-202ENST00000321728 NAT2P11245 290 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 LINC01590Q5TEZ4 76 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 RAB12Q6IQ22 244 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 C11orf87Q6NUJ2 197 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 SERINC2Q96SA4 455 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 TEX101Q9BY14 249 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 POTEKPQ9BYX7 375 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 C1orf198Q9H425 327 aa16.27■□□□□ 0.19
PRKCB-202ENST00000321728 KIAA0100Q14667 2235 aaKnown RBP16.27■□□□□ 0.19
PRKCB-202ENST00000321728 LINC01387J3KSC0 135 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 FGF17O60258 216 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 CD8AP01732 235 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 AMY2AP04746 511 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 CD34P28906 385 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 RORAP35398 523 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 RPS15AP62244 130 aaKnown RBP16.26■□□□□ 0.19
PRKCB-202ENST00000321728 ARHGAP40Q5TG30 622 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 BIVMQ86UB2 503 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 SPAG16Q8N0X2 631 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 OR5M8Q8NGP6 311 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 CAPNS2Q96L46 248 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 PTDSS2Q9BVG9 487 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 SLC19A3Q9BZV2 496 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 COMMD4Q9H0A8 199 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 CYB5R1Q9UHQ9 305 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 INSL6Q9Y581 213 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 BLOC1S5-TXNDC5H3BN57 136 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 WNT11O96014 354 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 AK1P00568 194 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 ATXN8OSP0DMR3 200 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 LIPCP11150 499 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 HOXB1P14653 301 aaPredicted RBP16.26■□□□□ 0.19
PRKCB-202ENST00000321728 ZNF345Q14585 488 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 ENPP7Q6UWV6 458 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 SLC16A9Q7RTY1 509 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 JAZF1Q86VZ6 243 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 C12orf76Q8N812 135 aaPredicted RBP16.26■□□□□ 0.19
PRKCB-202ENST00000321728 FAM117AQ9C073 453 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 SFXN1Q9H9B4 322 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 SRA1Q9HD15 236 aaKnown RBP16.26■□□□□ 0.19
PRKCB-202ENST00000321728 CTSFQ9UBX1 484 aa16.26■□□□□ 0.19
PRKCB-202ENST00000321728 PLEKHA6Q9Y2H5 1048 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms