RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 RACGAP1Q9H0H5 632 aa12.25□□□□□ -0.45
RPP40-201ENST00000319533 CAPN7Q9Y6W3 813 aa12.25□□□□□ -0.45
RPP40-201ENST00000319533 TENM1Q9UKZ4 2725 aa12.25□□□□□ -0.45
RPP40-201ENST00000319533 TRAV36DV7A0A075B6V5 113 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 A0A1B0GWA3 101 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 B4DSR2 109 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 FBP2O00757 339 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 MRASO14807 208 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 SLC22A2O15244 555 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 SYNGR3O43761 229 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 NPPAP01160 153 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 HTR2AP28223 471 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 GLRXP35754 106 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 SRP14P37108 136 aaKnown RBP12.24□□□□□ -0.45
RPP40-201ENST00000319533 NPRL3Q12980 569 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 SELPLGQ14242 412 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 MFSD13AQ14CX5 517 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 INTS11Q5TA45 600 aaKnown RBP12.24□□□□□ -0.45
RPP40-201ENST00000319533 FAM91A1Q658Y4 838 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 REP15Q6BDI9 236 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 SNX32Q86XE0 403 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 ZFAND2BQ8WV99 257 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 DNAJA4Q8WW22 397 aaPredicted RBP12.24□□□□□ -0.45
RPP40-201ENST00000319533 LRRC58Q96CX6 371 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 MRPL37Q9BZE1 423 aaKnown RBP12.24□□□□□ -0.45
RPP40-201ENST00000319533 MS4A5Q9H3V2 200 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 DENND2DQ9H6A0 471 aaPredicted RBP12.24□□□□□ -0.45
RPP40-201ENST00000319533 KAT8Q9H7Z6 458 aaKnown RBP12.24□□□□□ -0.45
RPP40-201ENST00000319533 EVA1AQ9H8M9 152 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 SELENONQ9NZV5 590 aa12.24□□□□□ -0.45
RPP40-201ENST00000319533 A0A087WUJ7 227 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 LOC100653049A0A140TA62 436 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 LYNX1G3V0Z9 82 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 M0R233 179 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 M0R3G1 203 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 CCDC22O60826 627 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 KRT34O76011 436 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 HPRP00739 348 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 HLA-HP01893 362 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 LYNX1P0DP58 116 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 RGS8P57771 180 aaPredicted RBP12.23□□□□□ -0.45
RPP40-201ENST00000319533 IL1RL1Q01638 556 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 FXNQ16595 210 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 GSG1Q2KHT4 349 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 KRT80Q6KB66 452 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 PATL1Q86TB9 770 aaKnown RBP12.23□□□□□ -0.45
RPP40-201ENST00000319533 COMTD1Q86VU5 262 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 PTOV1Q86YD1 416 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 SCAIQ8N9R8 606 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 SEMA6DQ8NFY4 1073 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 OR8J3Q8NGG0 315 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 OR10A6Q8NH74 314 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 ECSITQ9BQ95 431 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 MYLK2Q9H1R3 596 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 TPK1Q9H3S4 243 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 GID8Q9NWU2 228 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 ZNF224Q9NZL3 707 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 REV1Q9UBZ9 1251 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 TESQ9UGI8 421 aaKnown RBP12.23□□□□□ -0.45
RPP40-201ENST00000319533 SPEF1Q9Y4P9 236 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 CORINQ9Y5Q5 1042 aa12.23□□□□□ -0.45
RPP40-201ENST00000319533 TPST1O60507 370 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 SEC14L2O76054 403 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 MFN2O95140 757 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 VENTXO95231 258 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 ACHEP22303 614 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 PCGF2P35227 344 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 CAPZA2P47755 286 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 PCBP3P57721 371 aaKnown RBP12.22□□□□□ -0.45
RPP40-201ENST00000319533 MRPS11P82912 194 aaKnown RBP12.22□□□□□ -0.45
RPP40-201ENST00000319533 GLIPR1L2Q4G1C9 344 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 ALG10BQ5I7T1 473 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 NANOGP8Q6NSW7 305 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 ULK3Q6PHR2 472 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 THSD4Q6ZMP0 1018 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 GLCCI1Q86VQ1 547 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 RANBP3LQ86VV4 465 aaPredicted RBP12.22□□□□□ -0.45
RPP40-201ENST00000319533 WDFY1Q8IWB7 410 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 UEVLDQ8IX04 471 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 FITM2Q8N6M3 262 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
RPP40-201ENST00000319533 SMYD1Q8NB12 490 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 SLC26A7Q8TE54 656 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 RDH5Q92781 318 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 SLC47A1Q96FL8 570 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 NANOGQ9H9S0 305 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 TMEM27Q9HBJ8 222 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 ARMCX1Q9P291 453 aa12.22□□□□□ -0.45
RPP40-201ENST00000319533 M0QX08 132 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 TFP02787 698 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 HPXP02790 462 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 BGLAPP02818 100 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 COL8A2P25067 703 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 TMEM33P57088 247 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 CCNIQ14094 377 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 VMACQ2NL98 169 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 ZNF813Q6ZN06 617 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 CARM1Q86X55 608 aa12.21□□□□□ -0.45
RPP40-201ENST00000319533 CLDND2Q8NHS1 167 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms