RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 KRT77Q7Z794 578 aa12.97□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF563Q8TA94 476 aa12.97□□□□□ -0.33
PABPC1-201ENST00000318607 PHOSPHO1Q8TCT1 267 aa12.97□□□□□ -0.33
PABPC1-201ENST00000318607 GAL3ST4Q96RP7 486 aa12.97□□□□□ -0.33
PABPC1-201ENST00000318607 MKKSQ9NPJ1 570 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-201ENST00000318607 LRIT1Q9P2V4 623 aa12.97□□□□□ -0.33
PABPC1-201ENST00000318607 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-201ENST00000318607 FREM3P0C091 2139 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 OR5H14A6NHG9 310 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 OLFM2O95897 454 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 SPI1P17947 270 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 MAOBP27338 520 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 BDKRB2P30411 391 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 MAP3K8P41279 467 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 CLINT1Q14677 625 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 EIPR1Q53HC9 387 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF619Q8N2I2 560 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 LDAHQ9H6V9 325 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 PELI2Q9HAT8 420 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 MED17Q9NVC6 651 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 MKL2Q9ULH7 1088 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF337Q9Y3M9 751 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 NDUFB2O95178 105 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 CTSBP07858 339 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 DAOP14920 347 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 CD34P28906 385 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 RPS11P62280 158 aaKnown RBP eCLIP12.96□□□□□ -0.33
PABPC1-201ENST00000318607 SCRN3Q0VDG4 424 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 DYRK1AQ13627 763 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF626Q68DY1 528 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 GTPBP8Q8N3Z3 284 aaPredicted RBP12.96□□□□□ -0.33
PABPC1-201ENST00000318607 GALNT16Q8N428 558 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 GVQW1Q8N7I0 195 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 INO80EQ8NBZ0 244 aaPredicted RBP12.96□□□□□ -0.33
PABPC1-201ENST00000318607 PPP1R1CQ8WVI7 109 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 ROBO4Q8WZ75 1007 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 MOAP1Q96BY2 351 aa12.96□□□□□ -0.33
PABPC1-201ENST00000318607 RBM18Q96H35 190 aaKnown RBP12.96□□□□□ -0.33
PABPC1-201ENST00000318607 TMEM82A0PJX8 343 aa12.96□□□□□ -0.34
PABPC1-201ENST00000318607 SLC33A1O00400 549 aaPredicted RBP12.96□□□□□ -0.34
PABPC1-201ENST00000318607 S100A10P60903 97 aa12.96□□□□□ -0.34
PABPC1-201ENST00000318607 BAMBIQ13145 260 aa12.96□□□□□ -0.34
PABPC1-201ENST00000318607 ELAVL3Q14576 367 aaKnown RBP12.96□□□□□ -0.34
PABPC1-201ENST00000318607 STEAP1BQ6NZ63 245 aa12.96□□□□□ -0.34
PABPC1-201ENST00000318607 RPL22L1Q6P5R6 122 aaKnown RBP12.96□□□□□ -0.34
PABPC1-201ENST00000318607 PUSL1Q8N0Z8 303 aaKnown RBP12.96□□□□□ -0.34
PABPC1-201ENST00000318607 SEMA6DQ8NFY4 1073 aa12.96□□□□□ -0.34
PABPC1-201ENST00000318607 RGP1Q92546 391 aaPredicted RBP12.96□□□□□ -0.34
PABPC1-201ENST00000318607 TRIM2Q9C040 744 aa12.96□□□□□ -0.34
PABPC1-201ENST00000318607 PCBD2Q9H0N5 130 aa12.96□□□□□ -0.34
PABPC1-201ENST00000318607 WDFY3Q8IZQ1 3526 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 CACNA1DQ01668 2161 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 TMEM272A0A1B0GTI8 110 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 OR6C76A6NM76 312 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 DNASE2O00115 360 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-201ENST00000318607 PRAF2O60831 178 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 NDUFB6O95139 128 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 TGM6O95932 706 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 NID1P14543 1247 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 PRKXP51817 358 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 ACTC1P68032 377 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 ACTA1P68133 377 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 IRF4Q15306 451 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 KRBOX4Q5JUW0 171 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 CLEC9AQ6UXN8 241 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 DGAT2L6Q6ZPD8 337 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 OR2W3Q7Z3T1 314 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 ZNF227Q86WZ6 799 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 OR4C3Q8NH37 302 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 FGF13Q92913 245 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 CYYR1Q96J86 154 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 CTSVO60911 334 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 CDKN2AP42771 156 aaKnown RBP12.95□□□□□ -0.34
PABPC1-201ENST00000318607 SNRPEP62304 92 aaKnown RBP12.95□□□□□ -0.34
PABPC1-201ENST00000318607 C1orf61Q13536 156 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 SLC9A3R2Q15599 337 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 GLYATL3Q5SZD4 288 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 ARHGAP11AQ6P4F7 1023 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 OR5M9Q8NGP3 310 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 RSRP1Q9BUV0 290 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 NRSN2Q9GZP1 204 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 IGFLR1Q9H665 355 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 TBC1D29Q9UFV1 150 aa12.95□□□□□ -0.34
PABPC1-201ENST00000318607 COL4A4P53420 1690 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-201ENST00000318607 OR2T1O43869 369 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 VEGFDO43915 354 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 NFATC1O95644 943 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 CYB5AP00167 134 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 DBIP07108 87 aaKnown RBP12.94□□□□□ -0.34
PABPC1-201ENST00000318607 GRK6P43250 576 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 ID4P47928 161 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 PPP1CAP62136 330 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 ENPP2Q13822 863 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 HNRNPA1L2Q32P51 320 aaKnown RBP12.94□□□□□ -0.34
PABPC1-201ENST00000318607 LCN10Q6JVE6 187 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 BPIFB2Q8N4F0 458 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 OR9A4Q8NGU2 314 aa12.94□□□□□ -0.34
PABPC1-201ENST00000318607 NPDC1Q9NQX5 325 aaPredicted RBP12.94□□□□□ -0.34
PABPC1-201ENST00000318607 PHPT1Q9NRX4 125 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms