RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ARSBP15848 533 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 ATF1P18846 271 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 IL12BP29460 328 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 ERP29P30040 261 aaKnown RBP12.84□□□□□ -0.35
VRK3-201ENST00000316763 PSMB10P40306 273 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 CDKN2AP42771 156 aaKnown RBP12.84□□□□□ -0.35
VRK3-201ENST00000316763 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
VRK3-201ENST00000316763 RPS11P62280 158 aaKnown RBP eCLIP12.84□□□□□ -0.35
VRK3-201ENST00000316763 UTS2BQ765I0 119 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 KRT74Q7RTS7 529 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 NANOGNBQ7Z5D8 188 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 ANKRD37Q7Z713 158 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 SLC7A5P1Q8MH63 180 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 DTX3Q8N9I9 347 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 LSM14AQ8ND56 463 aaKnown RBP12.84□□□□□ -0.35
VRK3-201ENST00000316763 ZPLD1Q8TCW7 415 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 ZNRF4Q8WWF5 429 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 RNF170Q96K19 258 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 GRHPRQ9UBQ7 328 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 CAMK2AQ9UQM7 478 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 B3GALT1Q9Y5Z6 326 aa12.84□□□□□ -0.35
VRK3-201ENST00000316763 OR6C70A6NIJ9 312 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 LANCL1O43813 399 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 ALOX12BO75342 701 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 DHFRP00374 187 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 ASAH2BP0C7U1 165 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.36
VRK3-201ENST00000316763 SRMP19623 302 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 MMP15P51511 669 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 YIF1BQ5BJH7 314 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 CEP78Q5JTW2 689 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 DCAF12Q5T6F0 453 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 LINC01590Q5TEZ4 76 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 CBLN3Q6UW01 205 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 FAM198BQ6UWH4 519 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 FAM122BQ7Z309 247 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 LIX1LQ8IVB5 337 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 TOMM5Q8N4H5 51 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 YIPF7Q8N8F6 280 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 LRRC75AQ8NAA5 344 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 OR1N1Q8NGS0 311 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 OR5H6Q8NGV6 325 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 RPS4Y2Q8TD47 263 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 AKAP1Q92667 903 aaKnown RBP eCLIP12.83□□□□□ -0.36
VRK3-201ENST00000316763 ADIPOR1Q96A54 375 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 ADAD1Q96M93 576 aaKnown RBP12.83□□□□□ -0.36
VRK3-201ENST00000316763 TAAR9Q96RI9 348 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 ABHD1Q96SE0 405 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 ADOQ96SZ5 270 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 PDCD1LG2Q9BQ51 273 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 ZPBPQ9BS86 351 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 NUDT9Q9BW91 350 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 BEX2Q9BXY8 128 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 DPAGT1Q9H3H5 408 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 SLA2Q9H6Q3 261 aa12.83□□□□□ -0.36
VRK3-201ENST00000316763 PAQR5Q9NXK6 330 aaPredicted RBP12.83□□□□□ -0.36
VRK3-201ENST00000316763 NXT1Q9UKK6 140 aaKnown RBP12.83□□□□□ -0.36
VRK3-201ENST00000316763 PPIEQ9UNP9 301 aaKnown RBP12.83□□□□□ -0.36
VRK3-201ENST00000316763 AK6Q9Y3D8 172 aaKnown RBP12.83□□□□□ -0.36
VRK3-201ENST00000316763 A0A1B0GVC2 190 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 A6NIN4 97 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 FAM47E-STBD1D6RA91 191 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 ARHGEF9O43307 516 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 PRKNO60260 465 aaPredicted RBP12.82□□□□□ -0.36
VRK3-201ENST00000316763 ITGA10O75578 1167 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 RENP00797 406 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 TACR3P29371 465 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 UQCRC1P31930 480 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 EMP2P54851 167 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 NTRK2Q16620 822 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 PLA1AQ53H76 456 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 UBE2NLQ5JXB2 153 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 GPR139Q6DWJ6 353 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 OR2T4Q8NH00 348 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 MOGAT1Q96PD6 335 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 GAL3ST4Q96RP7 486 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 MNTQ99583 582 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 C7orf50Q9BRJ6 194 aaKnown RBP12.82□□□□□ -0.36
VRK3-201ENST00000316763 TMEM246Q9BRR3 403 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 NIPAL2Q9H841 368 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 FKRPQ9H9S5 495 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 NOX4Q9NPH5 578 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 SPTBN2O15020 2390 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 EIF4E2O60573 245 aaKnown RBP12.82□□□□□ -0.36
VRK3-201ENST00000316763 TCEA1P23193 301 aaKnown RBP12.82□□□□□ -0.36
VRK3-201ENST00000316763 CXCR1P25024 350 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 ID4P47928 161 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 MAB21L1Q13394 359 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 FAM199XQ6PEV8 388 aaPredicted RBP12.82□□□□□ -0.36
VRK3-201ENST00000316763 TMEM205Q6UW68 189 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 APOOLQ6UXV4 268 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 C9orf40Q8IXQ3 194 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 NFAM1Q8NET5 270 aaPredicted RBP12.82□□□□□ -0.36
VRK3-201ENST00000316763 METTL21AQ8WXB1 218 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 LPAR4Q99677 370 aa12.82□□□□□ -0.36
VRK3-201ENST00000316763 SMAD5Q99717 465 aaKnown RBP12.82□□□□□ -0.36
VRK3-201ENST00000316763 TRAF4Q9BUZ4 470 aaPredicted RBP12.82□□□□□ -0.36
VRK3-201ENST00000316763 ADAM19Q9H013 955 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms