RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZMAT3Q9HA38 289 aaKnown RBP12.66□□□□□ -0.38
SPAST-201ENST00000315285 ADAM18Q9Y3Q7 739 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 FER1L6Q2WGJ9 1857 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 IGLV3-16A0A075B6K0 115 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 CXorf51AA0A1B0GTR3 108 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 TPBGQ13641 420 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 MLC1Q15049 377 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 MKXQ8IYA7 352 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 OR5D18Q8NGL1 313 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 HINT2Q9BX68 163 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 HRH4Q9H3N8 390 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 RPS10P5Q9NQ39 176 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 SIRT5Q9NXA8 310 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 M0QYG6 137 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 SURF4O15260 269 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 PRICKLE3O43900 615 aaPredicted RBP12.66□□□□□ -0.38
SPAST-201ENST00000315285 FADS1O60427 444 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 C1QBP02746 253 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 FCGR2AP12318 317 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 EN2P19622 333 aaPredicted RBP12.66□□□□□ -0.38
SPAST-201ENST00000315285 HCCSP53701 268 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 DCDP81605 110 aaKnown RBP12.66□□□□□ -0.38
SPAST-201ENST00000315285 TMEM240Q5SV17 173 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 XAF1Q6GPH4 301 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 ADGRE4PQ86SQ3 457 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 ARHGAP9Q9BRR9 750 aa12.66□□□□□ -0.38
SPAST-201ENST00000315285 GABARAPH6UMI1 98 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 MTCP1P56278 107 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 MOB3CQ70IA8 216 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 BAHD1Q8TBE0 780 aaPredicted RBP12.65□□□□□ -0.38
SPAST-201ENST00000315285 ZNF775Q96BV0 537 aaPredicted RBP12.65□□□□□ -0.38
SPAST-201ENST00000315285 EMC3Q9P0I2 261 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 LRFN1Q9P244 771 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 OR52A1Q9UKL2 312 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 OR51B4Q9Y5P0 310 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 CD22P20273 847 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 SLC35A1P78382 337 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 FOXK1P85037 733 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 BDH1Q02338 343 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 BTN1A1Q13410 526 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 PRSS36Q5K4E3 855 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 CD300LGQ6UXG3 332 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 FBXL6Q8N531 539 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 NKAIN3Q8N8D7 197 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 ANKRD53Q8N9V6 530 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 GOT1L1Q8NHS2 421 aaPredicted RBP12.65□□□□□ -0.38
SPAST-201ENST00000315285 FGGYQ96C11 551 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 OR6C1Q96RD1 312 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 SULT1C2O00338 296 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 EIF4E2O60573 245 aaKnown RBP12.65□□□□□ -0.38
SPAST-201ENST00000315285 SPI1P17947 270 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 TGM4P49221 684 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 SLC36A2Q495M3 483 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 FCRL6Q6DN72 434 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 CCL4L1Q8NHW4 92 aa12.65□□□□□ -0.38
SPAST-201ENST00000315285 MRPL38Q96DV4 380 aaKnown RBP12.65□□□□□ -0.38
SPAST-201ENST00000315285 CD63P08962 238 aa12.65□□□□□ -0.39
SPAST-201ENST00000315285 S100A11P31949 105 aa12.65□□□□□ -0.39
SPAST-201ENST00000315285 SOX18P35713 384 aa12.65□□□□□ -0.39
SPAST-201ENST00000315285 ZNF93P35789 620 aaPredicted RBP12.65□□□□□ -0.39
SPAST-201ENST00000315285 HTR5AP47898 357 aa12.65□□□□□ -0.39
SPAST-201ENST00000315285 EVX1P49640 407 aa12.65□□□□□ -0.39
SPAST-201ENST00000315285 ELAVL1Q15717 326 aaKnown RBP12.65□□□□□ -0.39
SPAST-201ENST00000315285 SLC16A14Q7RTX9 510 aa12.65□□□□□ -0.39
SPAST-201ENST00000315285 DCXRQ7Z4W1 244 aa12.65□□□□□ -0.39
SPAST-201ENST00000315285 PFDN5Q99471 154 aa12.65□□□□□ -0.39
SPAST-201ENST00000315285 C6orf106Q9H6K1 298 aaPredicted RBP12.65□□□□□ -0.39
SPAST-201ENST00000315285 FGF20Q9NP95 211 aaPredicted RBP12.65□□□□□ -0.39
SPAST-201ENST00000315285 B8ZZF3 427 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 FBXO24O75426 580 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 CD53P19397 219 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 DIO1P49895 249 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 WNT3P56703 355 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 RPL27P61353 136 aaKnown RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 DGCR2P98153 550 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 TMEM201Q5SNT2 666 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 RABEPKQ7Z6M1 372 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 AGBL5Q8NDL9 886 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 OR14K1Q8NGZ2 314 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 LRFN5Q96NI6 719 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 SLC25A21Q9BQT8 299 aaPredicted RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 OR51B6Q9H340 312 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 ZNF286AQ9HBT8 521 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 PCDHGA1Q9Y5H4 931 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 WIF1Q9Y5W5 379 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 OR7C1O76099 320 aaPredicted RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 CSF3P09919 207 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 NAGAP17050 411 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 BLVRBP30043 206 aaPredicted RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 MFAP5Q13361 173 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 HEPHL1Q6MZM0 1159 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 ADGRF3Q8IZF5 1079 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 MICU1Q9BPX6 476 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 MCOLN1Q9GZU1 580 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 NUP214P35658 2090 aaPredicted RBP12.64□□□□□ -0.39
SPAST-201ENST00000315285 A6NL46 340 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 SNAPINO95295 136 aa12.64□□□□□ -0.39
SPAST-201ENST00000315285 CEACAM5P06731 702 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms