RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CHST6Q9GZX3 395 aa12.23□□□□□ -0.45
SKA3-202ENST00000314759 PURGQ9UJV8 347 aaKnown RBP12.23□□□□□ -0.45
SKA3-202ENST00000314759 BLOC1S5-TXNDC5H3BN57 136 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 HRKO00198 91 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 LSSP48449 732 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 ADPRHP54922 357 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 EIF2B5Q13144 721 aaKnown RBP12.22□□□□□ -0.45
SKA3-202ENST00000314759 SRSF5Q13243 272 aaKnown RBP12.22□□□□□ -0.45
SKA3-202ENST00000314759 DEFB115Q30KQ5 88 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 LRRN1Q6UXK5 716 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 SLC16A9Q7RTY1 509 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 FAM220AQ7Z4H9 259 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 BIVMQ86UB2 503 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 OR51A4Q8NGJ6 313 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 OR6N1Q8NGY5 312 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 OR8K3Q8NH51 312 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 ESRP2Q9H6T0 727 aaKnown RBP12.22□□□□□ -0.45
SKA3-202ENST00000314759 IFT22Q9H7X7 185 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 STARD5Q9NSY2 213 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 TAS2R3Q9NYW6 316 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 ACTR10Q9NZ32 417 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 PLCL2Q9UPR0 1127 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 SLC6A5Q9Y345 797 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 CACNA1CQ13936 2221 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 CHD9Q3L8U1 2897 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 TBC1D3IA0A087WXS9 549 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 MEIS3P1A6NDR6 274 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 DCTN6O00399 190 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 OR10H2O60403 315 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 AQP2P41181 271 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 ZNF141Q15928 474 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 TSSK4Q6SA08 328 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 ENPP7Q6UWV6 458 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 OR6K3Q8NGY3 331 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 TNFAIP8L1Q8WVP5 186 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 HERVK_113Q902F9 699 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 LMF2Q9BU23 707 aaKnown RBP12.22□□□□□ -0.45
SKA3-202ENST00000314759 WDR13Q9H1Z4 485 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 ZNF768Q9H5H4 540 aaKnown RBP12.22□□□□□ -0.45
SKA3-202ENST00000314759 BARX1Q9HBU1 254 aaPredicted RBP12.22□□□□□ -0.45
SKA3-202ENST00000314759 TMEM138Q9NPI0 162 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 STEAP1Q9UHE8 339 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 ZNF230Q9UIE0 474 aaPredicted RBP12.22□□□□□ -0.45
SKA3-202ENST00000314759 ERVK-19Q9WJR5 959 aa12.22□□□□□ -0.45
SKA3-202ENST00000314759 OR2W5A6NFC9 320 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 GGT3PA6NGU5 568 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 OR5K4A6NMS3 321 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 NPIPB9F8W1W9 429 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 CSF1P09603 554 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 SLC35E2P0CK97 266 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 MAOBP27338 520 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 ACTR1BP42025 376 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 PRPS1P60891 318 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 ACTR1AP61163 376 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 RUNX3Q13761 415 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 ODF4Q2M2E3 257 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 TANGO2Q6ICL3 276 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 ANKRD16Q6P6B7 361 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 RCBTB1Q8NDN9 531 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 OR51D1Q8NGF3 324 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 WNT2BQ93097 391 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 TSACCQ96A04 125 aaPredicted RBP12.21□□□□□ -0.45
SKA3-202ENST00000314759 TMEM106AQ96A25 262 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 ADAT1Q9BUB4 502 aaKnown RBP12.21□□□□□ -0.45
SKA3-202ENST00000314759 IGKV1D-42A0A075B6H8 117 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 TBC1D3DA0A087WVF3 549 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 OR4C45A6NMZ5 311 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 TBC1D3LB9A6J9 549 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 H0Y8X5 98 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 FOXS1O43638 330 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 PLRG1O43660 514 aaKnown RBP12.21□□□□□ -0.45
SKA3-202ENST00000314759 PRAMEF2O60811 474 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 CTAG2O75638 210 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 AQP8O94778 261 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 TBC1D3HP0C7X1 549 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 PGDP52209 483 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 GMFBP60983 142 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 FGL1Q08830 312 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 ENPP2Q13822 863 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 KCNAB1Q14722 419 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 ZNHIT3Q15649 155 aaPredicted RBP12.21□□□□□ -0.45
SKA3-202ENST00000314759 NNATQ16517 81 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 TBC1D3CQ6IPX1 549 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 ZNF227Q86WZ6 799 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 TBC1D3Q8IZP1 549 aaPredicted RBP12.21□□□□□ -0.45
SKA3-202ENST00000314759 EXD3Q8N9H8 876 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 OR4C3Q8NH37 302 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 C3orf49Q96BT1 292 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 SPACA7Q96KW9 195 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 GPX7Q96SL4 187 aaPredicted RBP12.21□□□□□ -0.45
SKA3-202ENST00000314759 ULBP3Q9BZM4 244 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 TWSG1Q9GZX9 223 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 SRA1Q9HD15 236 aaKnown RBP12.21□□□□□ -0.45
SKA3-202ENST00000314759 TAS2R8Q9NYW2 309 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 LRIT1Q9P2V4 623 aa12.21□□□□□ -0.45
SKA3-202ENST00000314759 MPDZO75970 2070 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 TRBV5-7A0A0A0MS05 114 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 ZNF254O75437 659 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 CSTAP01040 98 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 IFI6P09912 130 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms