RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 FAM46CQ5VWP2 391 aa16.46■□□□□ 0.23
SPSB4-201ENST00000310546 STEAP1BQ6NZ63 245 aa16.46■□□□□ 0.23
SPSB4-201ENST00000310546 SLC35F2Q8IXU6 374 aa16.46■□□□□ 0.23
SPSB4-201ENST00000310546 OR56A1Q8NGH5 318 aa16.46■□□□□ 0.23
SPSB4-201ENST00000310546 OR2T27Q8NH04 317 aa16.46■□□□□ 0.23
SPSB4-201ENST00000310546 ASB13Q8WXK3 278 aa16.46■□□□□ 0.23
SPSB4-201ENST00000310546 GAL3ST1Q99999 423 aa16.46■□□□□ 0.23
SPSB4-201ENST00000310546 ZNF281Q9Y2X9 895 aa16.46■□□□□ 0.23
SPSB4-201ENST00000310546 ADRA2CP18825 462 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 POU4F2Q12837 409 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 ELAVL1Q15717 326 aaKnown RBP16.46■□□□□ 0.22
SPSB4-201ENST00000310546 NKAPLQ5M9Q1 402 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 ZNF793Q6ZN11 406 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 SYS1Q8N2H4 156 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 SLC16A11Q8NCK7 471 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 OR5AP2Q8NGF4 316 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 ADAMTS15Q8TE58 950 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 MAP3K3Q99759 626 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 SFXN1Q9H9B4 322 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 KLF15Q9UIH9 416 aa16.46■□□□□ 0.22
SPSB4-201ENST00000310546 ZNF223Q9UK11 482 aaPredicted RBP16.46■□□□□ 0.22
SPSB4-201ENST00000310546 CDV3Q9UKY7 258 aaKnown RBP16.46■□□□□ 0.22
SPSB4-201ENST00000310546 GXYLT2A0PJZ3 443 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 M0QYG6 137 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 ST8SIA5O15466 376 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 CPT2P23786 658 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 DDX6P26196 483 aaKnown RBP eCLIP16.45■□□□□ 0.22
SPSB4-201ENST00000310546 PRKXP51817 358 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 EFNB2P52799 333 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 F2RL1P55085 397 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 AIMP2Q13155 320 aaKnown RBP16.45■□□□□ 0.22
SPSB4-201ENST00000310546 DHRS2Q13268 280 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 ZNF836Q6ZNA1 936 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 RGP1Q92546 391 aaPredicted RBP16.45■□□□□ 0.22
SPSB4-201ENST00000310546 RHBGQ9H310 441 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 ACKR4Q9NPB9 350 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 SMCO4Q9NRQ5 59 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 HAO2Q9NYQ3 351 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 SULT2B1O00204 365 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 HLA-AP01891 365 aaKnown RBP16.45■□□□□ 0.22
SPSB4-201ENST00000310546 CSN2P05814 226 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 METAP1P53582 386 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 PRAMEF17Q5VTA0 474 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 OR6K6Q8NGW6 343 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 RNF141Q8WVD5 230 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 IRF7Q92985 503 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 TNFRSF13CQ96RJ3 184 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 NRIP2Q9BQI9 281 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 LAT2Q9GZY6 243 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 CALML5Q9NZT1 146 aa16.45■□□□□ 0.22
SPSB4-201ENST00000310546 LOC100509620A0A075B734 347 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 A0A1B0GVT2 93 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 FGF16O43320 207 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 KCNAB1Q14722 419 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 SCGB2B2Q4G0G5 96 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 LIPNQ5VXI9 398 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 FIGNL1Q6PIW4 674 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 SLC29A4Q7RTT9 530 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 SLC2A12Q8TD20 617 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 SELENOIQ9C0D9 397 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 RSPH9Q9H1X1 276 aaPredicted RBP16.44■□□□□ 0.22
SPSB4-201ENST00000310546 KCNK15Q9H427 330 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 RCC2Q9P258 522 aaKnown RBP16.44■□□□□ 0.22
SPSB4-201ENST00000310546 WDR45Q9Y484 360 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 ATG4BQ9Y4P1 393 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 MDC1Q14676 2089 aaKnown RBP16.44■□□□□ 0.22
SPSB4-201ENST00000310546 AGPAT2O15120 278 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 PGAM2P15259 253 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 GPX4P36969 197 aaPredicted RBP16.44■□□□□ 0.22
SPSB4-201ENST00000310546 WASP42768 502 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 ZNF136P52737 540 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 DEFA6Q01524 100 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 PRAMEF8Q5VWM4 474 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 PRAMEF7Q5VXH5 474 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 LCTLQ6UWM7 567 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 TMEM64Q6YI46 380 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 RANBP3LQ86VV4 465 aaPredicted RBP16.44■□□□□ 0.22
SPSB4-201ENST00000310546 OR4K14Q8NGD5 310 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 OR51D1Q8NGF3 324 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 CDS1Q92903 461 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 COL26A1Q96A83 441 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 C3orf49Q96BT1 292 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 SLC35A4Q96G79 324 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 MYADMQ96S97 322 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 NKX3-1Q99801 234 aaPredicted RBP16.44■□□□□ 0.22
SPSB4-201ENST00000310546 FAM83CQ9BQN1 747 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 C6orf106Q9H6K1 298 aaPredicted RBP16.44■□□□□ 0.22
SPSB4-201ENST00000310546 RNF122Q9H9V4 155 aa16.44■□□□□ 0.22
SPSB4-201ENST00000310546 FARSAQ9Y285 508 aaKnown RBP16.44■□□□□ 0.22
SPSB4-201ENST00000310546 ARID1AO14497 2285 aa16.43■□□□□ 0.22
SPSB4-201ENST00000310546 A0A0B4J2A0 478 aa16.43■□□□□ 0.22
SPSB4-201ENST00000310546 ZNF729A6NN14 1252 aaPredicted RBP16.43■□□□□ 0.22
SPSB4-201ENST00000310546 LINC01565O15544 149 aa16.43■□□□□ 0.22
SPSB4-201ENST00000310546 GPRIN2O60269 458 aa16.43■□□□□ 0.22
SPSB4-201ENST00000310546 FOLR2P14207 255 aa16.43■□□□□ 0.22
SPSB4-201ENST00000310546 MUC1P15941 1255 aaPredicted RBP16.43■□□□□ 0.22
SPSB4-201ENST00000310546 NDUFS1P28331 727 aa16.43■□□□□ 0.22
SPSB4-201ENST00000310546 ODF4Q2M2E3 257 aa16.43■□□□□ 0.22
SPSB4-201ENST00000310546 OR52W1Q6IF63 320 aa16.43■□□□□ 0.22
SPSB4-201ENST00000310546 VN1R2Q8NFZ6 395 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms