RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 PDLIM3Q53GG5 364 aaPredicted RBP12.16□□□□□ -0.46
SNED1-201ENST00000310397 BCDIN3DQ7Z5W3 292 aaKnown RBP12.16□□□□□ -0.46
SNED1-201ENST00000310397 TEAD3Q99594 435 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 TAF9BQ9HBM6 251 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 DUSP22Q9NRW4 184 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 CUTCQ9NTM9 273 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 GFYI3L273 518 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 CD1EP15812 388 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 CPT2P23786 658 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 MTCP1P56278 107 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 ST8SIA4Q92187 359 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 PSMF1Q92530 271 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 NXF5Q9H1B4 397 aaKnown RBP12.16□□□□□ -0.46
SNED1-201ENST00000310397 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
SNED1-201ENST00000310397 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
SNED1-201ENST00000310397 SSTP61278 116 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 CCDC71Q8IV32 467 aaPredicted RBP12.16□□□□□ -0.46
SNED1-201ENST00000310397 VN1R3Q9BXE9 311 aa12.16□□□□□ -0.46
SNED1-201ENST00000310397 A0A1B0GTW7 788 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 HLA-HP01893 362 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 SOWAHCQ53LP3 525 aaPredicted RBP12.15□□□□□ -0.46
SNED1-201ENST00000310397 SLC35D2Q76EJ3 337 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.46
SNED1-201ENST00000310397 DOK1Q99704 481 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 ATP13A2Q9NQ11 1180 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
SNED1-201ENST00000310397 EMC4Q5J8M3 183 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 ZBTB37Q5TC79 503 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 MFSD12Q6NUT3 480 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 CDH20Q9HBT6 801 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 GCM1Q9NP62 436 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.15□□□□□ -0.46
SNED1-201ENST00000310397 TARM1B6A8C7 271 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 PRSS44E7EML9 344 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 CHRM4P08173 479 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 MAGEB1P43366 347 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 TMEM41BQ5BJD5 291 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 RDH10Q8IZV5 341 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 OR51S1Q8NGJ8 323 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 SMIM19Q96E16 107 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 SLIRPQ9GZT3 109 aaKnown RBP12.15□□□□□ -0.46
SNED1-201ENST00000310397 HCFC1R1Q9NWW0 138 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 HSPB2A8KAH6 182 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 TRAPPC2LH3BP13 241 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 MT-ATP6P00846 226 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 ZDHHC11BP0C7U3 371 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 NFYBP25208 207 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 MRPS34P82930 218 aaKnown RBP12.15□□□□□ -0.46
SNED1-201ENST00000310397 HSPB2Q16082 182 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 GCDHQ92947 438 aaPredicted RBP12.15□□□□□ -0.46
SNED1-201ENST00000310397 LURAP1Q96LR2 239 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 TRAV36DV7A0A075B6V5 113 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 CD63P08962 238 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 SLC19A1P41440 591 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 SSBP1Q04837 148 aaKnown RBP12.15□□□□□ -0.46
SNED1-201ENST00000310397 PDCD1LG2Q9BQ51 273 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 ZCCHC4Q9H5U6 513 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 CMC2Q9NRP2 79 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 KPTNQ9Y664 436 aa12.15□□□□□ -0.46
SNED1-201ENST00000310397 A6NL46 340 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 NME2P22392 152 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 SRP9P49458 86 aaKnown RBP12.15□□□□□ -0.47
SNED1-201ENST00000310397 YPEL5P62699 121 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 FOXK1P85037 733 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 TGFBR3Q03167 851 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 KCNRGQ8N5I3 272 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 NANPQ8TBE9 248 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 SLC6A18Q96N87 628 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 ENKD1Q9H0I2 346 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 NCDNQ9UBB6 729 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 TRAPPC4Q9Y296 219 aa12.15□□□□□ -0.47
SNED1-201ENST00000310397 SCGB1D1O95968 90 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 BLVRBP30043 206 aaPredicted RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 DSC1Q08554 894 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 ZNF620Q6ZNG0 422 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SLC46A1Q96NT5 459 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 CCNL2Q96S94 520 aaPredicted RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 SRRQ9GZT4 340 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 ZFAND5O76080 213 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 DBHP09172 617 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 PDZK1IP1Q13113 114 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 DOC2BQ14184 412 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SLC25A19Q9HC21 320 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SERPINF1P36955 418 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 TANGO2Q6ICL3 276 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 HEPHL1Q6MZM0 1159 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 ABHD17CQ6PCB6 329 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SLC39A5Q6ZMH5 540 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 KANSL1Q7Z3B3 1105 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 CDCA3Q99618 268 aaPredicted RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 ARHGAP9Q9BRR9 750 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 SELENOIQ9C0D9 397 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 MRPS28Q9Y2Q9 187 aaKnown RBP12.14□□□□□ -0.47
SNED1-201ENST00000310397 PRPH2P23942 346 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 C17orf67Q0P5P2 114 aa12.14□□□□□ -0.47
SNED1-201ENST00000310397 ATPAF1Q5TC12 328 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms