RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 MEIOBQ8N635 442 aa20.13■□□□□ 0.81
IRF3-201ENST00000309877 SYT14Q8NB59 555 aa20.13■□□□□ 0.81
IRF3-201ENST00000309877 EMC6Q9BV81 110 aa20.13■□□□□ 0.81
IRF3-201ENST00000309877 PCDHGB7Q9Y5F8 929 aa20.13■□□□□ 0.81
IRF3-201ENST00000309877 FKBP7Q9Y680 259 aa20.13■□□□□ 0.81
IRF3-201ENST00000309877 CELSR3Q9NYQ7 3312 aa20.13■□□□□ 0.81
IRF3-201ENST00000309877 TMEM129A0AVI4 362 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 DAPL1A0PJW8 107 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 NPIPA2E9PIF3 369 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 NPIPA3F8WFD2 350 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 MKRN2OSH3BPM6 223 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 DCTN6O00399 190 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 TRAF3IP2O43734 574 aaPredicted RBP20.12■□□□□ 0.81
IRF3-201ENST00000309877 TRMUO75648 421 aaKnown RBP20.12■□□□□ 0.81
IRF3-201ENST00000309877 CLDN15P56746 228 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 SRYQ05066 204 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 ZNF169Q14929 603 aaPredicted RBP20.12■□□□□ 0.81
IRF3-201ENST00000309877 SPHARQ15513 63 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 FAM122AQ96E09 287 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 COG8Q96MW5 612 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 TBX5Q99593 518 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 MFRPQ9BY79 579 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 ZDHHC11Q9H8X9 412 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 INPP5EQ9NRR6 644 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 ERVK13-1Q9NX77 482 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 B9D1Q9UPM9 204 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 LSM2Q9Y333 95 aaKnown RBP20.12■□□□□ 0.81
IRF3-201ENST00000309877 ASPMQ8IZT6 3477 aa20.12■□□□□ 0.81
IRF3-201ENST00000309877 ZNF726A6NNF4 738 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 AHCYL1O43865 530 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 SLC16A7O60669 478 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 ACTL6AO96019 429 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 ITGB2P05107 769 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 LIMS3P0CW19 117 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 LIMS4P0CW20 117 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 ZNF24P17028 368 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 CRABP1P29762 137 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 NAA10P41227 235 aaPredicted RBP20.11■□□□□ 0.81
IRF3-201ENST00000309877 ACTC1P68032 377 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 ACTA1P68133 377 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 BCL2A1Q16548 175 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 ARMCX4Q5H9R4 360 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 LINC01590Q5TEZ4 76 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 KLHL36Q8N4N3 616 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 NEIL3Q8TAT5 605 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 CPNE4Q96A23 557 aaPredicted RBP20.11■□□□□ 0.81
IRF3-201ENST00000309877 KCNK17Q96T54 332 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 MGLLQ99685 303 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 MED12Q93074 2177 aa20.11■□□□□ 0.81
IRF3-201ENST00000309877 TRGV5A0A0B4J1U4 118 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 SLC35F4A4IF30 521 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 SMAD9O15198 467 aaKnown RBP20.1■□□□□ 0.81
IRF3-201ENST00000309877 NOL3O60936 208 aaKnown RBP20.1■□□□□ 0.81
IRF3-201ENST00000309877 CENPAP49450 140 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 WNT4P56705 351 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 CLDN18P56856 261 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 RPS3AP61247 264 aaKnown RBP20.1■□□□□ 0.81
IRF3-201ENST00000309877 POU4F3Q15319 338 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 DNM1P34Q6PK57 102 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 ZBTB46Q86UZ6 589 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 ZNF511Q8NB15 262 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 OR9K2Q8NGE7 335 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 ADAD1Q96M93 576 aaKnown RBP20.1■□□□□ 0.81
IRF3-201ENST00000309877 SF3B5Q9BWJ5 86 aaKnown RBP20.1■□□□□ 0.81
IRF3-201ENST00000309877 RACGAP1Q9H0H5 632 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 TSPAN10Q9H1Z9 355 aaPredicted RBP20.1■□□□□ 0.81
IRF3-201ENST00000309877 RSL24D1Q9UHA3 163 aaKnown RBP20.1■□□□□ 0.81
IRF3-201ENST00000309877 LIPGQ9Y5X9 500 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 FREM3P0C091 2139 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 IGHG1P01857 330 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 ZNF708P17019 499 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 UCNP55089 124 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 CLDN17P56750 224 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 CLRN1P58418 232 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 WDFY1Q8IWB7 410 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 SLC35F2Q8IXU6 374 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 OR6X1Q8NH79 312 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 SLC25A44Q96H78 314 aaPredicted RBP20.1■□□□□ 0.81
IRF3-201ENST00000309877 RBP7Q96R05 134 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 RAXQ9Y2V3 346 aa20.1■□□□□ 0.81
IRF3-201ENST00000309877 SELENOFO60613 162 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 OR2T7P0C7T2 308 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 BLVRAP53004 296 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 TMPRSS3P57727 454 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 CAMK2DQ13557 499 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 SLC17A1Q14916 467 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 OR2G6Q5TZ20 316 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 VASNQ6EMK4 673 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 LYPD4Q6UWN0 246 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 TMPRSS11AQ6ZMR5 421 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 CREB3L2Q70SY1 520 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 OR2T27Q8NH04 317 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 SMAP2Q8WU79 429 aaPredicted RBP20.09■□□□□ 0.81
IRF3-201ENST00000309877 ROBO4Q8WZ75 1007 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 FUNDC2Q9BWH2 189 aa20.09■□□□□ 0.81
IRF3-201ENST00000309877 HLA-DQA2P01906 255 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 CTLA4P16410 223 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 GALEQ14376 348 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 CARD17Q5XLA6 110 aa20.08■□□□□ 0.81
IRF3-201ENST00000309877 ERI1Q8IV48 349 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms