RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 DNTTIP1Q9H147 329 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TMEM74BQ9NUR3 256 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 GPN3Q9UHW5 284 aaPredicted RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 SERTAD3Q9UJW9 196 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 FBXO4Q9UKT5 387 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TPRP12270 2363 aaKnown RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 RFPL4AA6NLU0 287 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 RFPL4AL1F8VTS6 287 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 DNASE2O00115 360 aaPredicted RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 CT62P0C5K7 136 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 PVRP15151 417 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 CSF2RAP15509 400 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 MGMTP16455 207 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 MAP3K8P41279 467 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 ACTR1BP42025 376 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 ACTR1AP61163 376 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 ADAM8P78325 824 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 SEZ6L2Q6UXD5 910 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 NPEPL1Q8NDH3 523 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 ZNF707Q96C28 371 aaPredicted RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TIMM29Q9BSF4 260 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 STARD5Q9NSY2 213 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 OBSL1O75147 1896 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 NUP210Q8TEM1 1887 aaPredicted RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 LRRK1Q38SD2 2015 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TBC1D3DA0A087WVF3 549 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TBC1D3IA0A087WXS9 549 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 A0A0D9SG52 128 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TBC1D3LB9A6J9 549 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 GPR75O95800 540 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 CYB5AP00167 134 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 OR4E1P0C645 316 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TBC1D3HP0C7X1 549 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 RPA2P15927 270 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 VAMP1P23763 118 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 UBE2IP63279 158 aaKnown RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 CST6Q15828 149 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 RAB11BQ15907 218 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 ITPRIPL2Q3MIP1 535 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 PRRT3Q5FWE3 981 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TBC1D3CQ6IPX1 549 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 ZNF425Q6IV72 752 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TMEM205Q6UW68 189 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 UNQ6126/PRO20091Q6UXV3 157 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 SLC36A1Q7Z2H8 476 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 TBC1D3Q8IZP1 549 aaPredicted RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 SPAG16Q8N0X2 631 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 INO80EQ8NBZ0 244 aaPredicted RBP10.17□□□□□ -0.78
PTPN7-201ENST00000309017 MFRPQ9BY79 579 aa10.17□□□□□ -0.78
PTPN7-201ENST00000309017 OR5H14A6NHG9 310 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 OTOL1A6NHN0 477 aaPredicted RBP10.16□□□□□ -0.78
PTPN7-201ENST00000309017 GPR31O00270 319 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 ADAM11O75078 769 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 CTNNB1P35222 781 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 PBX2P40425 430 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 RBM34P42696 430 aaKnown RBP10.16□□□□□ -0.78
PTPN7-201ENST00000309017 ACTBP60709 375 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 ACTG1P63261 375 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 FGL1Q08830 312 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 KCTD9Q7L273 389 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 OR5T2Q8NGG2 359 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 OR51A4Q8NGJ6 313 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 ATOH1Q92858 354 aaPredicted RBP10.16□□□□□ -0.78
PTPN7-201ENST00000309017 STACQ99469 402 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 C12orf57Q99622 126 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 TEX101Q9BY14 249 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 HDAC8Q9BY41 377 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 TREM1Q9NP99 234 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 EXOSC3Q9NQT5 275 aaKnown RBP10.16□□□□□ -0.78
PTPN7-201ENST00000309017 SERGEFQ9UGK8 458 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 GMEB2Q9UKD1 530 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 ZNF337Q9Y3M9 751 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 HEBP2Q9Y5Z4 205 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 SLC22A7Q9Y694 548 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 OR6A2O95222 327 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 HLA-AP01891 365 aaKnown RBP10.16□□□□□ -0.78
PTPN7-201ENST00000309017 CNR1P21554 472 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 IL10RAQ13651 578 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 SLC35D3Q5M8T2 416 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 FIGLAQ6QHK4 219 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 PLPP7Q8NBV4 271 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 THAP6Q8TBB0 222 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 SLC22A18Q96BI1 424 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 RBM18Q96H35 190 aaKnown RBP10.16□□□□□ -0.78
PTPN7-201ENST00000309017 PBX4Q9BYU1 374 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 RNF208Q9H0X6 261 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 FRRS1LQ9P0K9 344 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 GRHPRQ9UBQ7 328 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 MRPS2Q9Y399 296 aaKnown RBP10.16□□□□□ -0.78
PTPN7-201ENST00000309017 A0A1W2PQU0 124 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 PRR32B1ATL7 298 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 F8W036 122 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 CTAG2O75638 210 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 CEACAM5P06731 702 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 PRKXP51817 358 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 BLOC1S1P78537 153 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 CD163Q86VB7 1156 aa10.16□□□□□ -0.78
PTPN7-201ENST00000309017 C12orf76Q8N812 135 aaPredicted RBP10.16□□□□□ -0.78
PTPN7-201ENST00000309017 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms