RNA–Protein interactions for RNA: ENST00000307662.4

SYNPO-201, Transcript of synaptopodin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNPO, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-201ENST00000307662 MEP1BQ16820 701 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 ANKRD34AQ69YU3 496 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 ZNF425Q6IV72 752 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 FAM111BQ6SJ93 734 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 PAQR6Q6TCH4 344 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 KIAA0907Q7Z7F0 614 aaPredicted RBP16.01■□□□□ 0.15
SYNPO-201ENST00000307662 ZNF511Q8NB15 262 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 BADQ92934 168 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 OPALINQ96PE5 141 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 NUDT22Q9BRQ3 303 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 CHST2Q9Y4C5 530 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 SCO1O75880 301 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 S100A8P05109 93 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 ZNF93P35789 620 aaPredicted RBP16.01■□□□□ 0.15
SYNPO-201ENST00000307662 RAD52P43351 418 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 SMAD2Q15796 467 aaKnown RBP16.01■□□□□ 0.15
SYNPO-201ENST00000307662 ADIRFQ15847 76 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 ARSJQ5FYB0 599 aaPredicted RBP16.01■□□□□ 0.15
SYNPO-201ENST00000307662 ACOT7LQ6ZUV0 252 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 RBM45Q8IUH3 476 aaKnown RBP16.01■□□□□ 0.15
SYNPO-201ENST00000307662 TEAD3Q99594 435 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 PRR14Q9BWN1 585 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 PLSCR3Q9NRY6 295 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 GAB2Q9UQC2 676 aa16.01■□□□□ 0.15
SYNPO-201ENST00000307662 APEHP13798 732 aaKnown RBP16■□□□□ 0.15
SYNPO-201ENST00000307662 DPP4P27487 766 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 OGFOD3Q6PK18 319 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 WDR88Q6ZMY6 472 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 ZNF595Q8IYB9 648 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 ZNF740Q8NDX6 193 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 PDCD1LG2Q9BQ51 273 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SLC25A37Q9NYZ2 338 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 EXO1Q9UQ84 846 aaKnown RBP16■□□□□ 0.15
SYNPO-201ENST00000307662 MT-ND4LP03901 98 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 NFYBP25208 207 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 EEF1A1P68104 462 aaKnown RBP16■□□□□ 0.15
SYNPO-201ENST00000307662 RNLSQ5VYX0 342 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 NPSR1Q6W5P4 371 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 Q6ZSR6 202 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SYT9Q86SS6 491 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 CDH26Q8IXH8 852 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SECTM1Q8WVN6 248 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 NKX3-1Q99801 234 aaPredicted RBP16■□□□□ 0.15
SYNPO-201ENST00000307662 ULBP2Q9BZM5 246 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 URGCP-MRPS24S4R325 110 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 TRAV36DV7A0A075B6V5 113 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 TAAR5O14804 337 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 PHF1O43189 567 aaPredicted RBP16■□□□□ 0.15
SYNPO-201ENST00000307662 GALR3O60755 368 aaPredicted RBP16■□□□□ 0.15
SYNPO-201ENST00000307662 OPN5Q6U736 354 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SH2D5Q6ZV89 423 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 FTSJ1Q9UET6 329 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 H0YGG7 62 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 OR2C1O95371 312 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 OPN1LWP04000 364 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SBK2P0C263 348 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SPNP16150 400 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 HLA-FP30511 346 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 OR1D4P47884 311 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 C12orf57Q99622 126 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 CSAG2Q9Y5P2 127 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 MPPED1O15442 326 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 CD14P08571 375 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 HLA-DOBP13765 273 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 CLDN2P57739 230 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 BAXQ07812 192 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 CATR1Q13166 79 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 OR1S2Q8NGQ3 325 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 ANGPTL6Q8NI99 470 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 ULBP3Q9BZM4 244 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 P2RY12Q9H244 342 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SPNS1Q9H2V7 528 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SCPEP1Q9HB40 452 aa16■□□□□ 0.15
SYNPO-201ENST00000307662 SLC5A10A0PJK1 596 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 PRKRAO75569 313 aaKnown RBP15.99■□□□□ 0.15
SYNPO-201ENST00000307662 TPOP07202 933 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 MAOBP27338 520 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 IL2RGP31785 369 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 IHHQ14623 411 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 TMEM217Q8N7C4 229 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 HPSE2Q8WWQ2 592 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 CDC14CA4D256 554 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 SLCO2B1O94956 709 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 OTX2P32243 289 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 SLC48A1Q6P1K1 146 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 TMPRSS7Q7RTY8 843 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 OR5D18Q8NGL1 313 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 FGGYQ96C11 551 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 SRRQ9GZT4 340 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 OR6C76A6NM76 312 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 RPS15P62841 145 aaKnown RBP15.99■□□□□ 0.15
SYNPO-201ENST00000307662 AARDQ4LEZ3 155 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 ZNF852Q6ZMS4 543 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 RFLNAQ6ZTI6 216 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 TMEM99Q8N816 258 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 SLC23A2Q9UGH3 650 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 OR52A1Q9UKL2 312 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 TMX2-CTNND1H3BSU7 103 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 TRIM77I1YAP6 450 aa15.99■□□□□ 0.15
SYNPO-201ENST00000307662 CTBSQ01459 385 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms