RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ANKRD34AQ69YU3 496 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 ZNF681Q96N22 645 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 RBMX2Q9Y388 322 aaKnown RBP9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 V9GY05 133 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 SCN2AQ99250 2005 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 TMEM212A6NML5 194 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 CRYBA1P05813 215 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 LCN1P31025 176 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 RAB31Q13636 194 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 WIPI1Q5MNZ9 446 aaPredicted RBP9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 MSI2Q96DH6 328 aaKnown RBP9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 LGALS12Q96DT0 336 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 TECTBQ96PL2 329 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 TSPAN4O14817 238 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 CD14P08571 375 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 ACP2P11117 423 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 MYF6P23409 242 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 SLC6A12P48065 614 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 CLN3Q13286 438 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 MMP27Q9H306 513 aa9.8□□□□□ -0.84
SYNPO2-201ENST00000307142 TRBV5-4A0A0C4DH59 114 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 HS3ST1O14792 307 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 BMXP51813 675 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 PNLIPRP2P54317 469 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 B4GALNT1Q00973 533 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 KIF18BQ86Y91 864 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 GPR87Q9BY21 358 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 PRMT8Q9NR22 394 aaPredicted RBP9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 OR6C65A6NJZ3 312 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 VAMP5O95183 116 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 HOXD12P35452 270 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 BSGP35613 385 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 TEKQ02763 1124 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 SNTB2Q13425 540 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 SPINK14Q6IE38 97 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 LYPD8Q6UX82 237 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 FBXW12Q6X9E4 464 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 GCNT2Q8N0V5 402 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 OR2V1Q8NHB1 315 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 RTL8AQ9BWD3 113 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 EMC7Q9NPA0 242 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 MTCL1Q9Y4B5 1905 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 IGHV5-10-1A0A0J9YXX1 117 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 BMP2P12643 396 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 NID1P14543 1247 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 NTRK2Q16620 822 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 OR10G3Q8NGC4 313 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 ST8SIA1Q92185 356 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 SELENOIQ9C0D9 397 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 TMEM38AQ9H6F2 299 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 SLC22A11Q9NSA0 550 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 NDRG4Q9ULP0 352 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 A0A087WV62 115 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 TSPAN11A1L157 253 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 HMGN4O00479 90 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 DEGS1O15121 323 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 TK1P04183 234 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 CCL4P13236 92 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 TEAD1P28347 426 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 BDKRB2P30411 391 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 EMDP50402 254 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 ACER2Q5QJU3 275 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 RTL6Q6ICC9 239 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 OVCH1Q7RTY7 1134 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 FBXO17Q96EF6 278 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 MRGPRX4Q96LA9 322 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 OCSTAMPQ9BR26 566 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 GALNT9Q9HCQ5 603 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 SIDT1Q9NXL6 827 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 TMPRSS3P57727 454 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 CD300LGQ6UXG3 332 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 B3GLCTQ6Y288 498 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 FAM185AQ8N0U4 392 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 DEFB108BQ8NET1 73 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 ABHD11Q8NFV4 315 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 OXGR1Q96P68 337 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 C20orf27Q9GZN8 174 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 NARFLQ9H6Q4 476 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 TIMM10BQ9Y5J6 103 aa9.79□□□□□ -0.84
SYNPO2-201ENST00000307142 AGFG2O95081 481 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 DEFA4P12838 97 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 CD34P28906 385 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 SRP14P37108 136 aaKnown RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 FOXK2Q01167 660 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 THEM4Q5T1C6 240 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 SFRP4Q6FHJ7 346 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 WDR74Q6RFH5 385 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 ADGRG5Q8IZF4 528 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 UTP4Q969X6 686 aaKnown RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 ZNF286AQ9HBT8 521 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 TREM1Q9NP99 234 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 CD300LBA8K4G0 201 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 SYT5O00445 386 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 PDGFBP01127 241 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 FTH1P19P0C7X4 201 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 TBXA2RP21731 343 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 ABCD3P28288 659 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 SOX8P57073 446 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 ZNF45Q02386 682 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 FAM76BQ5HYJ3 339 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms