RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 AQP2P41181 271 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 EIF1P41567 113 aaKnown RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 GFERP55789 205 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 E2F1Q01094 437 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 ID2Q02363 134 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 MAPK14Q16539 360 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 RPTNQ6XPR3 784 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 SLC35F3Q8IY50 421 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 ACOT4Q8N9L9 421 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 C19orf47Q8N9M1 422 aaKnown RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 MFSD9Q8NBP5 474 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 OR13C5Q8NGS8 318 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 GHSRQ92847 366 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 GAL3ST3Q96A11 431 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 MMABQ96EY8 250 aaPredicted RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 SEC22AQ96IW7 307 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 UBL7Q96S82 380 aaPredicted RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 GTF2A1LQ9UNN4 478 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 NPFFR2Q9Y5X5 522 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 HMSDA8MTL9 139 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 CLDN4O14493 209 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 B4GALT2O60909 372 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 HPP00738 406 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 TFPIP10646 304 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 NT5EP21589 574 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 BDKRB2P30411 391 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 DCTDP32321 178 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 AKR1C3P42330 323 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 ADAM5Q6NVV9 412 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 CCDC74AQ96AQ1 378 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 SEMA6CQ9H3T2 930 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 GFOD1Q9NXC2 390 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 ATXN7L1Q9ULK2 861 aaPredicted RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 UNC80Q8N2C7 3258 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 H3BSH0 61 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 SNRNP70P08621 437 aaKnown RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 PTHLHP12272 177 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 CSNK2A2P19784 350 aaPredicted RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 CPT2P23786 658 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 EPHA8P29322 1005 aaPredicted RBP9.98□□□□□ -0.81
LSM3-201ENST00000306024 ADH7P40394 386 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 NCBP2P52298 156 aaKnown RBP eCLIP9.98□□□□□ -0.81
LSM3-201ENST00000306024 SYPL1Q16563 259 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 OR2W3Q7Z3T1 314 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 ZNF615Q8N8J6 731 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 OR4D9Q8NGE8 314 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 OR4Q3Q8NH05 313 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 AKR7LQ8NHP1 331 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 PEX11GQ96HA9 241 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 OPN4Q9UHM6 478 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 KCNK7Q9Y2U2 307 aa9.98□□□□□ -0.81
LSM3-201ENST00000306024 C13orf42A0A1B0GVH6 325 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 A0A1W2PRQ8 180 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 ZC3H12DA2A288 527 aaKnown RBP9.97□□□□□ -0.81
LSM3-201ENST00000306024 SNRPGP15A8MWD9 76 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 ST8SIA5O15466 376 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 SELENOFO60613 162 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 GLB1P16278 677 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 CAPZBP47756 277 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 PPP1CAP62136 330 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 PRR5P85299 388 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 TP53I3Q53FA7 332 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 TTLL10Q6ZVT0 673 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 LRRTM1Q86UE6 522 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 TMEM151BQ8IW70 566 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 NRMQ8IXM6 262 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 CMTM4Q8IZR5 234 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 SYNPRQ8TBG9 265 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 CASTOR1Q8WTX7 329 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 SLC6A16Q9GZN6 736 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 ZCCHC4Q9H5U6 513 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 GNG8Q9UK08 70 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 KCNE1BA0A087WTH5 132 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 TRBV2A0A0J9YWF9 115 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 TLCD2A6NGC4 264 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 TMEM150CB9EJG8 249 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 PYCARD-AS1I3L0S3 204 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 SLC2A10O95528 541 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 ATF1P18846 271 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 HIST1H1TP22492 207 aaPredicted RBP9.97□□□□□ -0.81
LSM3-201ENST00000306024 VAMP1P23763 118 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 OR2B8PP59922 312 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 SIM1P81133 766 aaPredicted RBP9.97□□□□□ -0.81
LSM3-201ENST00000306024 CLINT1Q14677 625 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 UBE2NLQ5JXB2 153 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 GLT8D1Q68CQ7 371 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 KCTD9Q7L273 389 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 FAM98AQ8NCA5 519 aaKnown RBP9.97□□□□□ -0.81
LSM3-201ENST00000306024 OR4C6Q8NH72 309 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 THAP4Q8WY91 577 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 SMPDL3BQ92485 455 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 C3orf49Q96BT1 292 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 MS4A4EQ96PG1 132 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 TINAGQ9UJW2 476 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 A0A1W2PPV9 198 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 GABARAPH6UMI1 98 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 SYT5O00445 386 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 PLPP1O14494 284 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 LIPCP11150 499 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms