RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 IGHG1P01857 330 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 HLA-HP01893 362 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 CD79AP11912 226 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 CALCRP30988 508 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 PSME3P61289 254 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 IFI44LQ53G44 452 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 CBLL1Q75N03 491 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 PIWIL3Q7Z3Z3 882 aaKnown RBP22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 NUP37Q8NFH4 326 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 POM121Q96HA1 1249 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 FNDC11Q9BVV2 318 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 SEC61A2Q9H9S3 476 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 INIPQ9NRY2 104 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 B3GNT2Q9NY97 397 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 ABCD2Q9UBJ2 740 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 VSTM5A8MXK1 200 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 MCIDASD6RGH6 385 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 RNF223E7ERA6 249 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 SERPINA1P01009 418 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 F13BP05160 661 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 CELA3BP08861 270 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 PGA4P0DJD7 388 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 PGA3P0DJD8 388 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 SERPINF1P36955 418 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 DAP3P51398 398 aaKnown RBP22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 DSCR9P59020 149 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 SNRPD2P62316 118 aaKnown RBP22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 SWI5Q1ZZU3 235 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 FKBP9P1Q75LS8 142 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 OFCC1Q8IZS5 231 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 FAM162AQ96A26 154 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 FBXO17Q96EF6 278 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 RHNO1Q9BSD3 238 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 REG4Q9BYZ8 158 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 HEATR1Q9H583 2144 aaKnown RBP22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 SPAG4Q9NPE6 437 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 FBXL3Q9UKT7 428 aa22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 NIPBLQ6KC79 2804 aaeCLIP22.95■■□□□ 1.26
CDKN2A-201ENST00000304494 PLCE1Q9P212 2302 aa22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 CENPBD1B2RD01 187 aa22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 UBL3O95164 117 aa22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 HOXB4P17483 251 aaPredicted RBP22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 AQP2P41181 271 aa22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 CLRN1P58418 232 aa22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 TRAM2Q15035 370 aa22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 CLEC2AQ6UVW9 174 aa22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 MYPOPQ86VE0 399 aaPredicted RBP22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 BPIFA2Q96DR5 249 aa22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 STX18Q9P2W9 335 aaKnown RBP22.94■■□□□ 1.26
CDKN2A-201ENST00000304494 IGHV2OR16-5A0A0B4J2B6 119 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 RAB36O95755 333 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 TSPAN19P0C672 248 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 YAP1P46937 504 aaKnown RBP22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 GNGT1P63211 74 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 ADIPOQQ15848 244 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 MST1LQ2TV78 715 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 VHLLQ6RSH7 139 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 HSH2DQ96JZ2 352 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 ZNF442Q9H7R0 627 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 RPS6KA6Q9UK32 745 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 FBXO9Q9UK97 447 aaPredicted RBP22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 SNX13Q9Y5W8 968 aa22.93■■□□□ 1.26
CDKN2A-201ENST00000304494 NPIPB13A6NJU9 1138 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 B9A039 149 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 NPIPB4C9JG80 1138 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 DHHO43323 396 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 FARS2O95363 451 aaKnown RBP22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 QDPRP09417 244 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 OR4A8P0C604 315 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 IFI30P13284 250 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 EFNA4P52798 201 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 HGFACQ04756 655 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 PIGFQ07326 219 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 EFNB3Q15768 340 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 HIST3H3Q16695 136 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 LRFN4Q6PJG9 635 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 CYP4Z1Q86W10 505 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 NOXO1Q8NFA2 376 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 ASB10Q8WXI3 467 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 ADA2Q9NZK5 511 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 RHCGQ9UBD6 479 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 HIF3AQ9Y2N7 669 aa22.92■■□□□ 1.26
CDKN2A-201ENST00000304494 J3KTA2 159 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 PIP5K1CO60331 668 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 GMNNO75496 209 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 OR8G3PP0DMU2 310 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 ZNF14P17017 642 aaPredicted RBP22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 PTDSS1P48651 473 aaKnown RBP22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 RAB1AP62820 205 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 RNF113BQ8IZP6 322 aaKnown RBP22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 SLC22A24Q8N4F4 322 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 MOSPD2Q8NHP6 518 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 HTRA1Q92743 480 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 SEPHS2Q99611 448 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 MRPL13Q9BYD1 178 aaKnown RBP22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 MAN2C1Q9NTJ4 1040 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 TMEM38BQ9NVV0 291 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 ZNF224Q9NZL3 707 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 FKBP7Q9Y680 259 aa22.91■■□□□ 1.26
CDKN2A-201ENST00000304494 FFAR1O14842 300 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms