RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ZDHHC5Q9C0B5 715 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 WWTR1Q9GZV5 400 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 MUTYHQ9UIF7 546 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 SSX2Q16385 188 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 PDLIM3Q53GG5 364 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 CPNE4Q96A23 557 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 SLCO4A1Q96BD0 722 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 NRSN2Q9GZP1 204 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 PDFQ9HBH1 243 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 LYRM4Q9HD34 91 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 NME2P22392 152 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 GP2P55259 537 aaKnown RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 UPRTQ96BW1 309 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 KCNK2O95069 426 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 EDN3P14138 238 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 EPHA5P54756 1037 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 MANEAQ5SRI9 462 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 PGAP1Q75T13 922 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 TCEAL2Q9H3H9 227 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 TMEM184BQ9Y519 407 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 ZC3H12DA2A288 527 aaKnown RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 C2orf72A6NCS6 295 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 PRAMEF4O60810 478 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 NSA2O95478 260 aaKnown RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 IGFBP1P08833 259 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 PIPP12273 146 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 SOWAHCQ53LP3 525 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 OR6M1Q8NGM8 313 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 TEAD3Q99594 435 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 NKX3-1Q99801 234 aaPredicted RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 NDRG4Q9ULP0 352 aaKnown RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 TMEM129A0AVI4 362 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 RFXAPO00287 272 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF728P0DKX0 622 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 MRPS34P82930 218 aaKnown RBP12.83□□□□□ -0.36
PRKCB-201ENST00000303531 C1orf140Q5VVS0 124 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 FGF22Q9HCT0 170 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 CROCCQ5TZA2 2017 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 AHDC1Q5TGY3 1603 aaPredicted RBP12.82□□□□□ -0.36
PRKCB-201ENST00000303531 RPL34P49207 117 aaKnown RBP12.82□□□□□ -0.36
PRKCB-201ENST00000303531 CATR1Q13166 79 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 NKAIN3Q8N8D7 197 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 FAM213BQ8TBF2 198 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 UTP23Q9BRU9 249 aaKnown RBP12.82□□□□□ -0.36
PRKCB-201ENST00000303531 PUS1Q9Y606 427 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRKCB-201ENST00000303531 TOR1AO14656 332 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 KITLGP21583 273 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 UBE2KP61086 200 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 DMBX1Q8NFW5 382 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 NIPAL2Q9H841 368 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 FKRPQ9H9S5 495 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 SPHK1Q9NYA1 384 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF705GA8MUZ8 300 aaPredicted RBP12.82□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF195O14628 629 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 CPT2P23786 658 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 PTGER4P35408 488 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 SLC6A12P48065 614 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 CCR9P51686 369 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 CARD18P57730 90 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 CD300LGQ6UXG3 332 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 OR1E3Q8WZA6 343 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 PKMYT1Q99640 499 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 SLCO5A1Q9H2Y9 848 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 CALHM2Q9HA72 323 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 TNFRSF12AQ9NP84 129 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 RAB22AQ9UL26 194 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 A0A087WUU8 490 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 KRBOX1C9JBD0 128 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 ENPP1P22413 925 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF77Q15935 545 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 ZNF385BQ569K4 471 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 SHEQ5VZ18 495 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 TUBG2Q9NRH3 451 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 A0A1W2PR48 441 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 OR6C65A6NJZ3 312 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 MRPL19P49406 292 aaKnown RBP12.82□□□□□ -0.36
PRKCB-201ENST00000303531 PMPCAQ10713 525 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 PIGTQ969N2 578 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 ACOXLQ9NUZ1 547 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.82□□□□□ -0.36
PRKCB-201ENST00000303531 VASH1Q7L8A9 365 aaPredicted RBP12.82□□□□□ -0.36
PRKCB-201ENST00000303531 PIGQQ9BRB3 760 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 DUSP22Q9NRW4 184 aa12.82□□□□□ -0.36
PRKCB-201ENST00000303531 TMEM221A6NGB7 291 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 RAB4AP20338 218 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 S100A11P31949 105 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 WBP2Q969T9 261 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 ANKRD9Q96BM1 317 aaPredicted RBP12.81□□□□□ -0.36
PRKCB-201ENST00000303531 GABARAPL1Q9H0R8 117 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 TMEM30AQ9NV96 361 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 DAPP1Q9UN19 280 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
PRKCB-201ENST00000303531 NPFFR2Q9Y5X5 522 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms