RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 RAP1BP61224 184 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 RAP1AP62834 184 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 RUNX1T1Q06455 604 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 ITGADQ13349 1161 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 SLC36A3Q495N2 470 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 ERMAPQ96PL5 475 aaPredicted RBP21.59■■□□□ 1.05
HOXC9-201ENST00000303450 CIB1Q99828 191 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 TSSK6Q9BXA6 273 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 NPDC1Q9NQX5 325 aaPredicted RBP21.59■■□□□ 1.05
HOXC9-201ENST00000303450 KRT84Q9NSB2 600 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 POFUT2Q9Y2G5 429 aa21.59■■□□□ 1.05
HOXC9-201ENST00000303450 CENPBD1B2RD01 187 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 XKRYO14609 159 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 TP53P04637 393 aaPredicted RBP21.58■■□□□ 1.04
HOXC9-201ENST00000303450 OSMP13725 252 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 APEHP13798 732 aaKnown RBP21.58■■□□□ 1.04
HOXC9-201ENST00000303450 ANPEPP15144 967 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 IGHV1-2P23083 117 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 NOS3P29474 1203 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 STAC2Q6ZMT1 411 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 SYT14Q8NB59 555 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 OR8D4Q8NGM9 314 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 ZNF519Q8TB69 540 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 TEX47Q8TBZ9 253 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 MAGEE2Q8TD90 523 aaPredicted RBP21.58■■□□□ 1.04
HOXC9-201ENST00000303450 OSBPL10Q9BXB5 764 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 MRPL13Q9BYD1 178 aaKnown RBP21.58■■□□□ 1.04
HOXC9-201ENST00000303450 TAS2R16Q9NYV7 291 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 GLTPQ9NZD2 209 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 ICE1Q9Y2F5 2266 aa21.58■■□□□ 1.04
HOXC9-201ENST00000303450 TEX13CA0A0J9YWL9 993 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 C16orf97H3BN30 126 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 ARHGEF9O43307 516 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 LYZL6O75951 148 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 POU1F1P28069 291 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 UGT2B10P36537 528 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 PCYT1AP49585 367 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 ROR2Q01974 943 aaKnown RBP21.57■■□□□ 1.04
HOXC9-201ENST00000303450 PHYHD1Q5SRE7 291 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 SFRP5Q5T4F7 317 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 C9orf135Q5VTT2 229 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 KDM4DQ6B0I6 523 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 NOXO1Q8NFA2 376 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 HDAC2Q92769 488 aaKnown RBP21.57■■□□□ 1.04
HOXC9-201ENST00000303450 KISS1RQ969F8 398 aaPredicted RBP21.57■■□□□ 1.04
HOXC9-201ENST00000303450 TMEM54Q969K7 222 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 RASD2Q96D21 266 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 RBM4BQ9BQ04 359 aaKnown RBP21.57■■□□□ 1.04
HOXC9-201ENST00000303450 RBM4Q9BWF3 364 aaKnown RBP21.57■■□□□ 1.04
HOXC9-201ENST00000303450 HDHD5Q9BXW7 423 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 ULBP2Q9BZM5 246 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 CRLF2Q9HC73 371 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 COL12A1Q99715 3063 aa21.57■■□□□ 1.04
HOXC9-201ENST00000303450 C19orf84I3L1E1 186 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 SOCS2O14508 198 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 IMPA2O14732 288 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 ARPC3O15145 178 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 PSMB1P20618 241 aaKnown RBP21.56■■□□□ 1.04
HOXC9-201ENST00000303450 COX5AP20674 150 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 IL32P24001 234 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 MPGP29372 298 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 CD47Q08722 323 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 KRR1Q13601 381 aaKnown RBP21.56■■□□□ 1.04
HOXC9-201ENST00000303450 LINGO2Q7L985 606 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 OR2T33Q8NG76 320 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 PSMG3-AS1Q96PY0 264 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 KCNK17Q96T54 332 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 C9orf16Q9BUW7 83 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 DCLRE1BQ9H816 532 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 GPR35Q9HC97 309 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 GPR52Q9Y2T5 361 aa21.56■■□□□ 1.04
HOXC9-201ENST00000303450 USP9YO00507 2555 aaPredicted RBP21.56■■□□□ 1.04
HOXC9-201ENST00000303450 CIB4A0PJX0 185 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 IDH3BO43837 385 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 TXNDC12O95881 172 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 ITGA5P08648 1049 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 NR2C1P13056 603 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 IGFBP5P24593 272 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 FOXG1P55316 489 aaPredicted RBP21.55■■□□□ 1.04
HOXC9-201ENST00000303450 SORDQ00796 357 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 TGFBR3Q03167 851 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 TSC22D1Q15714 1073 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 MESTQ5EB52 335 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 PARP8Q8N3A8 854 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 ZNF433Q8N7K0 673 aaPredicted RBP21.55■■□□□ 1.04
HOXC9-201ENST00000303450 EME1Q96AY2 570 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 ALG12Q9BV10 488 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 RPL36A-HNRNPH2H7BZ11 118 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 BHLHE40O14503 412 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 CDH2P19022 906 aaPredicted RBP21.55■■□□□ 1.04
HOXC9-201ENST00000303450 PPP2R2BQ00005 443 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 MYBPC1Q00872 1141 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 HIST3H3Q16695 136 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 CEACAM16Q2WEN9 425 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 BHLHA15Q7RTS1 189 aaPredicted RBP21.55■■□□□ 1.04
HOXC9-201ENST00000303450 CBR4Q8N4T8 237 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 RBP7Q96R05 134 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 BAIAP2Q9UQB8 552 aa21.55■■□□□ 1.04
HOXC9-201ENST00000303450 H7C1C5 153 aa21.54■■□□□ 1.04
HOXC9-201ENST00000303450 EI24O14681 340 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms