RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 OR10R2Q8NGX6 335 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 OR14A16Q8NHC5 309 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 SLC2A12Q8TD20 617 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 PPP1R1CQ8WVI7 109 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 SUSD6Q92537 303 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 STARD5Q9NSY2 213 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 STEAP1Q9UHE8 339 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 FRMPD3Q5JV73 1810 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 A0A0B4J2A0 478 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 GP1BAP07359 652 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 AVPR2P30518 371 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-201ENST00000300527 MEOX2P50222 304 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 PPIAP62937 165 aaKnown RBP13.37□□□□□ -0.27
COL6A2-201ENST00000300527 SLC35D2Q76EJ3 337 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 DPY19L4Q7Z388 723 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 GRASPQ7Z6J2 395 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-201ENST00000300527 MYADMQ96S97 322 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 ZNF350Q9GZX5 532 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 ZNF304Q9HCX3 659 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 NDRG3Q9UGV2 375 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 SHPKQ9UHJ6 478 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 LAMP5Q9UJQ1 280 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 INSL6Q9Y581 213 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 VCANP13611 3396 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 LYPD3O95274 346 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 SLC35G6P0C7Q6 338 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 ERGP11308 486 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 GLT8D1Q68CQ7 371 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 CRIPAKQ8N1N5 446 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 EID2Q8N6I1 236 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 INO80EQ8NBZ0 244 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-201ENST00000300527 OR6N1Q8NGY5 312 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 CCDC107Q8WV48 283 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 ZNF764Q96H86 408 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-201ENST00000300527 ELF4Q99607 663 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-201ENST00000300527 FRRS1LQ9P0K9 344 aa13.37□□□□□ -0.27
COL6A2-201ENST00000300527 GPN3Q9UHW5 284 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-201ENST00000300527 DENND4CQ5VZ89 1909 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 DCDC2BA2VCK2 349 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 LINC00587B1AMM8 73 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 FGF17O60258 216 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 OR10H2O60403 315 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CALCBP10092 127 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CSF2RBP32927 897 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 NPBWR1P48145 328 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 PDZK1IP1Q13113 114 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 ALKBH1Q13686 389 aaKnown RBP13.36□□□□□ -0.27
COL6A2-201ENST00000300527 PLEKHN1Q494U1 663 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-201ENST00000300527 C3orf33Q6P1S2 294 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 GABRG1Q8N1C3 465 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 ZSCAN1Q8NBB4 408 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 TMED6Q8WW62 240 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 HRH4Q9H3N8 390 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 HAO2Q9NYQ3 351 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CGGBP1Q9UFW8 167 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-201ENST00000300527 TMEM218A2RU14 115 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 ZNF749O43361 778 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 XRCC3O43542 346 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 B3GALT2O43825 422 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CTAG2O75638 210 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CRYBA1P05813 215 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CT62P0C5K7 136 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 AKR1C4P17516 323 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CALCRP30988 508 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 PRKXP51817 358 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 ILF3Q12906 894 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL6A2-201ENST00000300527 HFEQ30201 348 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 COMMD4Q9H0A8 199 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 ZNF275Q9NSD4 429 aaPredicted RBP13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CHRNA9Q9UGM1 479 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 DOCK9Q9BZ29 2069 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 FGF18O76093 207 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 INHAP05111 366 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 THBS1P07996 1170 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 PEBP1P30086 187 aaKnown RBP13.36□□□□□ -0.27
COL6A2-201ENST00000300527 AGTR1P30556 359 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CAPZA2P47755 286 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 FAM53BQ14153 422 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 UNQ9370/PRO34162Q6UXP9 181 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 CD99L2Q8TCZ2 262 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 LRRC3BQ96PB8 259 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 TLNRD1Q9H1K6 362 aa13.36□□□□□ -0.27
COL6A2-201ENST00000300527 MRPS2Q9Y399 296 aaKnown RBP13.36□□□□□ -0.27
COL6A2-201ENST00000300527 MDC1Q14676 2089 aaKnown RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 A0A0B4J2E0 115 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 A0A0D9SG52 128 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 A0A1B0GX12 115 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 APOC1P02654 83 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 TACSTD2P09758 323 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 PVRP15151 417 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 CDKN2AP42771 156 aaKnown RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 ARFIP1P53367 373 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 SNRPEP62304 92 aaKnown RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 EIF2B1Q14232 305 aaKnown RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 ELAVL3Q14576 367 aaKnown RBP13.35□□□□□ -0.27
COL6A2-201ENST00000300527 C2orf76Q3KRA6 126 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 LY6G6FQ5SQ64 297 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 NKAIN2Q5VXU1 208 aa13.35□□□□□ -0.27
COL6A2-201ENST00000300527 VN1R4Q7Z5H5 301 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms