RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 CST5P28325 142 aaPredicted RBP11.87□□□□□ -0.51
TVP23A-201ENST00000299866 AQP2P41181 271 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 MNDAP41218 407 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 DHRS2Q13268 280 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 FHL1Q13642 323 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 NKPD1Q17RQ9 610 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ANKRD16Q6P6B7 361 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF600Q6ZNG1 722 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF627Q7L945 461 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 INO80EQ8NBZ0 244 aaPredicted RBP11.87□□□□□ -0.51
TVP23A-201ENST00000299866 OR4K14Q8NGD5 310 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 OR5M8Q8NGP6 311 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 TMEM106AQ96A25 262 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF350Q9GZX5 532 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 RSPH9Q9H1X1 276 aaPredicted RBP11.87□□□□□ -0.51
TVP23A-201ENST00000299866 FRRS1LQ9P0K9 344 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 SERTAD3Q9UJW9 196 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 KCNK6Q9Y257 313 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 KLHDC2Q9Y2U9 406 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 LRRC72A6NJI9 287 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 EEF1E1-BLOC1S5C9J1V9 151 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ALOX12BO75342 701 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 CD1AP06126 327 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 CD96P40200 585 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ALKBH1Q13686 389 aaKnown RBP11.87□□□□□ -0.51
TVP23A-201ENST00000299866 MLF2Q15773 248 aaPredicted RBP11.87□□□□□ -0.51
TVP23A-201ENST00000299866 RHOUQ7L0Q8 258 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 CLEC1AQ8NC01 280 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 OR10R2Q8NGX6 335 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 ZDHHC4Q9NPG8 344 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
TVP23A-201ENST00000299866 SSX5O60225 188 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF28P17035 718 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 SMCO1Q147U7 214 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 EXOSC7Q15024 291 aaKnown RBP11.86□□□□□ -0.51
TVP23A-201ENST00000299866 OTPQ5XKR4 325 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 FAM109BQ6ICB4 259 aaPredicted RBP11.86□□□□□ -0.51
TVP23A-201ENST00000299866 DNM1P46Q6ZS02 220 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 TMEFF1Q8IYR6 380 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 NPEPL1Q8NDH3 523 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 OR6S1Q8NH40 331 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 CASTOR1Q8WTX7 329 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 ARL11Q969Q4 196 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 ZBTB8AQ96BR9 441 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 PHYHIPLQ96FC7 376 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 CPED1A4D0V7 1026 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 TVP23AA6NH52 213 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF860A6NHJ4 632 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 WNT11O96014 354 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 S100A6P06703 90 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF888P0CJ79 500 aaPredicted RBP11.86□□□□□ -0.51
TVP23A-201ENST00000299866 GABRA3P34903 492 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 PRKXP51817 358 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 CAP1Q01518 475 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 PLAURQ03405 335 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 GGTLC2Q14390 218 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 ATPAF1Q5TC12 328 aaPredicted RBP11.86□□□□□ -0.51
TVP23A-201ENST00000299866 LEG1Q6P5S2 330 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 KCTD9Q7L273 389 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 CRIPAKQ8N1N5 446 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 TMED6Q8WW62 240 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 TCEAL3Q969E4 200 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 RNF166Q96A37 237 aaPredicted RBP11.86□□□□□ -0.51
TVP23A-201ENST00000299866 ALG12Q9BV10 488 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 BCL2L14Q9BZR8 327 aa11.86□□□□□ -0.51
TVP23A-201ENST00000299866 SULT2B1O00204 365 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 TGM5O43548 720 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 ICOSLGO75144 302 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 CD8AP01732 235 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 AVPR2P30518 371 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 AKR1C3P42330 323 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 RAB28P51157 221 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 RAB5BP61020 215 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 C2orf76Q3KRA6 126 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 CCDC74AQ96AQ1 378 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 POTEKPQ9BYX7 375 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 SRA1Q9HD15 236 aaKnown RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 EPHA6Q9UF33 1036 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 GTF2A1LQ9UNN4 478 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 A0A0B4J2A0 478 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 A0A0B4J2E0 115 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 A0A1B0GX12 115 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 RNGTTO60942 597 aaKnown RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 DCNP07585 359 aaKnown RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 ADRB3P13945 408 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 DDX6P26196 483 aaKnown RBP eCLIP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 HAAOP46952 286 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 DCDP81605 110 aaKnown RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 ZNF345Q14585 488 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 INPP5JQ15735 1006 aaPredicted RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 DEFB134Q4QY38 66 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 TMEM205Q6UW68 189 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 CD163Q86VB7 1156 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 MICU1Q9BPX6 476 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 HRH4Q9H3N8 390 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 C1orf198Q9H425 327 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 SHPKQ9UHJ6 478 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 MRM2Q9UI43 246 aaKnown RBP11.85□□□□□ -0.51
TVP23A-201ENST00000299866 C13orf42A0A1B0GVH6 325 aa11.85□□□□□ -0.51
TVP23A-201ENST00000299866 A0A1W2PQ45 241 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms