RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 SLC35A1P78382 337 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 Q6ZSR9 355 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR51D1Q8NGF3 324 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR2M2Q96R28 347 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 EMC7Q9NPA0 242 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PPP3CBP16298 524 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC14A2Q15849 920 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HACD4Q5VWC8 232 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CORO6Q6QEF8 472 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC46A3Q7Z3Q1 461 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 YRDCQ86U90 279 aaKnown RBP12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR5H6Q8NGV6 325 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 EMG1Q92979 244 aaKnown RBP12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 C11orf54Q9H0W9 315 aaPredicted RBP12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SEMA6CQ9H3T2 930 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CHD2O14647 1828 aaKnown RBP12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TOR1AO14656 332 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR10J4P0C629 311 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 BCKDHBP21953 392 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ALKBH6Q3KRA9 238 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 KCTD11Q693B1 232 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAM71CQ8NEG0 241 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MFRPQ9BY79 579 aa12.51□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CLDN24A6NM45 220 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR6C76A6NM76 312 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SOCS7O14512 581 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HTR4Q13639 388 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 KHDC1LQ5JSQ8 128 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GLIPR1L1Q6UWM5 242 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC16A11Q8NCK7 471 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 THOC3Q96J01 351 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 UGT2A1Q9Y4X1 527 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 URGCP-MRPS24S4R325 110 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MAGEB4O15481 346 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF93P35789 620 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NDUFA6P56556 154 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TAS2R30P59541 319 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DCAF7P61962 342 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FCN2Q15485 313 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PTCRAQ6ISU1 281 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR56B4Q8NH76 319 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PDLIM5Q96HC4 596 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FGF21Q9NSA1 209 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZFP92A6NM28 416 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 H0YIV9 168 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 IRS1P35568 1242 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MRPS21P82921 87 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RUNX2Q13950 521 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TRMT12Q53H54 448 aaKnown RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TMEM207Q6UWW9 146 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HIPK2Q9H2X6 1198 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NIPAL2Q9H841 368 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR52A1Q9UKL2 312 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC22A7Q9Y694 548 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF587BE7ETH6 402 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 C17orf112F2Z3M2 114 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NFYAP23511 347 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SNCAP37840 140 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAM219BQ5XKK7 198 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SSX9Q7RTT3 188 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GPR78Q96P69 363 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PLK3Q9H4B4 646 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RNF212BA8MTL3 300 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR2T7P0C7T2 308 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NKAIN4Q8IVV8 208 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TMEM102Q8N9M5 508 aaPredicted RBP12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR2T27Q8NH04 317 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FCRL1Q96LA6 429 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 KCNJ15Q99712 375 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PIGQQ9BRB3 760 aa12.5□□□□□ -0.41
CHRFAM7A-201ENST00000299847 F11P03951 625 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CSNK1G2P78368 415 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF169Q14929 603 aaPredicted RBP12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HSD17B11Q8NBQ5 300 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NAT6Q93015 286 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 UPRTQ96BW1 309 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 A4GALTQ9NPC4 353 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC39A9Q9NUM3 307 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 UFSP2Q9NUQ7 469 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ACOXLQ9NUZ1 547 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MYF5P13349 255 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HOXD11P31277 338 aaPredicted RBP12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 C17orf67Q0P5P2 114 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RTL6Q6ICC9 239 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 STEAP1BQ6NZ63 245 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SPRED1Q7Z699 444 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RNF113BQ8IZP6 322 aaKnown RBP12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RHOXF1Q8NHV9 184 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RNF170Q96K19 258 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LTB4R2Q9NPC1 389 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TAS2R4Q9NYW5 299 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MYH4Q9Y623 1939 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 E9PI62 339 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RAB5CP51148 216 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ACSM1Q08AH1 577 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CATR1Q13166 79 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GGTA1PQ4G0N0 100 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms